Top 10 genes with highest correlation to Rv1637c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0069c/sdaA | (cc=0.4087) | info on Rv0069c/sdaA |
| Rv1768/PE_PGRS31 | (cc=0.3761) | info on Rv1768/PE_PGRS31 |
| Rv1722/- | (cc=0.3627) | info on Rv1722/- |
| Rv3283/sseA | (cc=0.3486) | info on Rv3283/sseA |
| Rv3299c/atsB | (cc=0.3477) | info on Rv3299c/atsB |
| Rv1423/whiA | (cc=0.3428) | info on Rv1423/whiA |
| Rv0230c/php | (cc=0.3378) | info on Rv0230c/php |
| Rv0063/- | (cc=0.3364) | info on Rv0063/- |
| Rv0976c/- | (cc=0.3348) | info on Rv0976c/- |
| Rv3516/echA19 | (cc=0.331) | info on Rv3516/echA19 |
Correlation of Rv1637c/- with Rv0069c/sdaA
Normalized LFCs for Rv1637c/-:
(description and provenance of datasets)
| Rv1637c/- | Rv0069c/sdaA | |
| Fe_supp_jason_reseq | 0.084 | 0.205 |
| low_pH_jason_reseq | -0.119 | -1.367 |
| NO_jason_reseq | -0.213 | -1.265 |
| B6_jason_reseq | -0.011 | -0.208 |
| MHCII_jason_reseq | -0.51 | 0.127 |
| Isoniazid02 | -0.314 | -0.049 |
| Rifampicin4 | 0.095 | -0.233 |
| Ethambutol3 | -0.57 | 0.627 |
| Meropenem3 | -0.435 | 0.278 |
| Vancomycin16 | -0.053 | 0.836 |
| Rv2680_day32 | -0.78 | -0.372 |
| H37Rv_KO_MarP | 0.264 | 0.217 |
| hypoxia_3wks | -0.279 | -0.319 |
| hypoxia_6wks | -0.535 | -0.299 |
| glycerol | 1.466 | 2.392 |
| cholesterol | 0.857 | 6.0 |
| AJ | 0.215 | 0.187 |
| Bibs02 | -0.617 | -0.592 |
| Bibs02c | -0.267 | 0.196 |
| BL6 | 0.52 | 0.084 |
| BL6a | -0.518 | 0.307 |
| BXD01 | -0.58 | -0.154 |
| BXD010 | -0.236 | -0.171 |
| BXD011 | 0.642 | 0.68 |
| BXD03 | -0.329 | -0.631 |
| BXD04 | -0.122 | -0.425 |
| BXD05 | 0.0 | -0.223 |
| BXD06 | -0.31 | -0.038 |
| BXD07 | -0.377 | -0.207 |
| BXD08 | 0.348 | 0.329 |
| BXD09 | -0.273 | 0.076 |
| CAST | -0.093 | -0.976 |
| CCcont | -0.78 | 0.176 |
| DS01 | 0.305 | -0.279 |
| DS02 | -0.34 | -0.325 |
| DS04 | -0.039 | -1.036 |
| DS0c | -0.05 | 0.363 |
| GP01 | 0.747 | 0.265 |
| GP02 | 0.024 | -0.138 |
| GP0c | -0.243 | 0.639 |
| NOD | -0.172 | -1.596 |
| NZO | -0.581 | -1.472 |
| PWK | 0.521 | 0.183 |
| H37Rv_KO_CtpC | 0.091 | 0.213 |
| H37Rv_KO_CtpD | -0.022 | -1.75 |
| H37Rv_KO_Rv1272 | 0.288 | -0.72 |
| H37Rv_KO_SugABC | -0.27 | 0.94 |
| H37Rv_KO_MbtN | -0.594 | 1.301 |
| Trans05 | -0.045 | -0.5 |
| macrophage_unactivated | -0.606 | 0.18 |
| IL1 | 0.294 | 0.383 |
| Rapamycin | 0.092 | 0.807 |
| Tcell | 0.401 | 0.42 |
| GMCSF | -0.415 | -0.264 |
| IFNab | -0.762 | 1.167 |
| IFNg | -0.329 | 0.249 |
| IFNg_GMCSF1 | -0.421 | -0.512 |
| Rv1432_day32 | 0.579 | 0.415 |
| Rv1565c_day32 | -0.204 | -0.355 |
| secA2_input | 0.152 | 1.656 |
| delta_Rv3594 | -0.89 | -0.783 |
| delta_Rv3717 | -0.617 | -0.2 |
| delta_Rv3811 | 0.101 | 0.299 |
| delta_Rv0954 | 0.074 | 0.399 |
| PonA1 | 0.926 | 0.943 |
| EccD1_KO | 0.487 | 0.802 |
| EspI_KO | -0.237 | -0.645 |
| PE35_KO | 0.088 | 0.055 |
| PPE68_KO | -0.214 | 0.781 |
| glycerol2 | 0.186 | 0.171 |
| lignocerate | -0.037 | 0.183 |
| oleate | -0.123 | -0.264 |
| phosphatidylcholine | 0.464 | -0.067 |
| acetate | -0.748 | -0.191 |
| glucAc | -0.021 | -0.249 |
| Rv0950ko | 0.501 | 0.582 |
| Rv1096ko | 0.0 | 0.582 |
| Rv3684ko | -0.485 | -0.069 |
| delta_otsA_trehalose | -1.021 | 0.027 |