Top 10 genes with highest correlation to Rv1625c/cya:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2015c/- | (cc=0.5543) | info on Rv2015c/- |
| Rv1527c/pks5 | (cc=0.4968) | info on Rv1527c/pks5 |
| Rv1950c/- | (cc=0.4845) | info on Rv1950c/- |
| Rv3532/PPE61 | (cc=0.4697) | info on Rv3532/PPE61 |
| Rv3879c/espK | (cc=0.4577) | info on Rv3879c/espK |
| Rv2559c/- | (cc=0.4542) | info on Rv2559c/- |
| Rv2340c/PE_PGRS39 | (cc=0.4535) | info on Rv2340c/PE_PGRS39 |
| Rv3056/dinP | (cc=0.4534) | info on Rv3056/dinP |
| Rv2025c/- | (cc=0.4531) | info on Rv2025c/- |
| Rv3892c/PPE69 | (cc=0.4486) | info on Rv3892c/PPE69 |
Correlation of Rv1625c/cya with Rv2015c/-
Normalized LFCs for Rv1625c/cya:
(description and provenance of datasets)
| Rv1625c/cya | Rv2015c/- | |
| Fe_supp_jason_reseq | -0.439 | 0.18 |
| low_pH_jason_reseq | -0.074 | -0.142 |
| NO_jason_reseq | -0.992 | -0.486 |
| B6_jason_reseq | 0.518 | 0.448 |
| MHCII_jason_reseq | 0.025 | 0.237 |
| Isoniazid02 | 0.503 | 0.218 |
| Rifampicin4 | -0.122 | 0.777 |
| Ethambutol3 | 0.683 | 0.717 |
| Meropenem3 | 0.642 | 0.328 |
| Vancomycin16 | 0.066 | 0.021 |
| Rv2680_day32 | -0.221 | -0.264 |
| H37Rv_KO_MarP | -0.169 | -0.385 |
| hypoxia_3wks | -0.128 | -0.235 |
| hypoxia_6wks | -1.391 | -0.697 |
| glycerol | 0.083 | -0.278 |
| cholesterol | -0.264 | -0.516 |
| AJ | -0.024 | 0.598 |
| Bibs02 | 0.052 | 0.742 |
| Bibs02c | 0.179 | 0.579 |
| BL6 | -0.295 | -1.128 |
| BL6a | -0.201 | -0.423 |
| BXD01 | -0.486 | -0.68 |
| BXD010 | -0.35 | -0.026 |
| BXD011 | -0.397 | -0.594 |
| BXD03 | -0.764 | -0.133 |
| BXD04 | -0.613 | -0.177 |
| BXD05 | -0.296 | -0.577 |
| BXD06 | -0.373 | -0.834 |
| BXD07 | -0.548 | -1.08 |
| BXD08 | -0.15 | -0.957 |
| BXD09 | -0.472 | -0.406 |
| CAST | 0.434 | 0.389 |
| CCcont | -0.844 | -0.744 |
| DS01 | -0.108 | -0.024 |
| DS02 | -0.55 | -0.203 |
| DS04 | 0.323 | 0.048 |
| DS0c | 0.302 | 0.456 |
| GP01 | 1.077 | 0.632 |
| GP02 | 0.7 | 0.362 |
| GP0c | 0.498 | 0.536 |
| NOD | 0.26 | 0.472 |
| NZO | 0.498 | 0.705 |
| PWK | 0.671 | 1.238 |
| H37Rv_KO_CtpC | 0.241 | -0.074 |
| H37Rv_KO_CtpD | 0.301 | 0.704 |
| H37Rv_KO_Rv1272 | 0.054 | -0.124 |
| H37Rv_KO_SugABC | 0.253 | -0.763 |
| H37Rv_KO_MbtN | 0.333 | 0.258 |
| Trans05 | 0.089 | 0.088 |
| macrophage_unactivated | -0.215 | -1.228 |
| IL1 | 0.015 | -0.136 |
| Rapamycin | -0.43 | -0.678 |
| Tcell | 0.384 | -0.551 |
| GMCSF | -0.166 | 0.0 |
| IFNab | -0.744 | -0.998 |
| IFNg | -0.39 | -0.77 |
| IFNg_GMCSF1 | -0.066 | -0.072 |
| Rv1432_day32 | -0.168 | 0.173 |
| Rv1565c_day32 | -0.071 | 0.185 |
| secA2_input | 0.008 | 0.604 |
| delta_Rv3594 | -0.506 | -0.04 |
| delta_Rv3717 | -0.686 | 0.394 |
| delta_Rv3811 | -0.573 | 0.274 |
| delta_Rv0954 | -0.319 | 0.022 |
| PonA1 | -0.035 | -0.155 |
| EccD1_KO | 0.283 | 0.691 |
| EspI_KO | 0.188 | -0.083 |
| PE35_KO | 0.029 | 0.729 |
| PPE68_KO | 0.067 | 0.672 |
| glycerol2 | 0.308 | -0.304 |
| lignocerate | 0.246 | 0.093 |
| oleate | 0.773 | -0.147 |
| phosphatidylcholine | 0.641 | 0.046 |
| acetate | -0.145 | 0.196 |
| glucAc | 0.065 | 0.164 |
| Rv0950ko | 0.054 | -0.449 |
| Rv1096ko | -0.841 | 0.0 |
| Rv3684ko | -0.593 | -0.753 |
| delta_otsA_trehalose | 0.953 | 0.418 |