Top 10 genes with highest correlation to Rv1624c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1489A/- | (cc=0.4551) | info on Rv1489A/- |
| Rv2313c/- | (cc=0.4511) | info on Rv2313c/- |
| Rv2409c/- | (cc=0.4498) | info on Rv2409c/- |
| Rv1899c/lppD | (cc=0.4467) | info on Rv1899c/lppD |
| Rv2408/PE24 | (cc=0.4464) | info on Rv2408/PE24 |
| Rv2970c/lipN | (cc=0.4444) | info on Rv2970c/lipN |
| Rv3473c/bpoA | (cc=0.4244) | info on Rv3473c/bpoA |
| Rv3055/- | (cc=0.4177) | info on Rv3055/- |
| Rv3313c/add | (cc=0.415) | info on Rv3313c/add |
| Rv1901/cinA | (cc=0.4145) | info on Rv1901/cinA |
Correlation of Rv1624c/- with Rv1489A/-
Normalized LFCs for Rv1624c/-:
(description and provenance of datasets)
| Rv1624c/- | Rv1489A/- | |
| Fe_supp_jason_reseq | -1.34 | -0.111 |
| low_pH_jason_reseq | -0.346 | -1.375 |
| NO_jason_reseq | -2.969 | -0.942 |
| B6_jason_reseq | 0.739 | -0.513 |
| MHCII_jason_reseq | 0.8 | -0.636 |
| Isoniazid02 | -3.086 | -4.051 |
| Rifampicin4 | 0.617 | 0.699 |
| Ethambutol3 | -2.706 | -3.827 |
| Meropenem3 | -2.126 | -3.157 |
| Vancomycin16 | -0.597 | -1.157 |
| Rv2680_day32 | 1.524 | 0.305 |
| H37Rv_KO_MarP | 0.38 | 0.36 |
| hypoxia_3wks | -0.096 | -1.001 |
| hypoxia_6wks | -2.76 | 0.251 |
| glycerol | -0.111 | -1.463 |
| cholesterol | 0.217 | -0.259 |
| AJ | -0.721 | -0.84 |
| Bibs02 | -0.758 | -1.856 |
| Bibs02c | 0.259 | 1.085 |
| BL6 | 0.476 | -0.816 |
| BL6a | -0.02 | -0.336 |
| BXD01 | 0.038 | -0.925 |
| BXD010 | -1.535 | -1.227 |
| BXD011 | -0.555 | -0.285 |
| BXD03 | -2.204 | -2.615 |
| BXD04 | -0.081 | 1.619 |
| BXD05 | -0.283 | -0.301 |
| BXD06 | -0.592 | 0.212 |
| BXD07 | -0.534 | -0.791 |
| BXD08 | -0.476 | 0.096 |
| BXD09 | -0.71 | -0.539 |
| CAST | 0.325 | -0.474 |
| CCcont | -0.35 | 0.118 |
| DS01 | -2.69 | 0.07 |
| DS02 | -4.318 | 0.429 |
| DS04 | -0.178 | -0.453 |
| DS0c | -0.806 | -0.506 |
| GP01 | 0.77 | 0.457 |
| GP02 | 0.821 | 0.998 |
| GP0c | -0.013 | 0.75 |
| NOD | -1.32 | -1.09 |
| NZO | -1.104 | 0.558 |
| PWK | -0.635 | 0.099 |
| H37Rv_KO_CtpC | -0.913 | -0.521 |
| H37Rv_KO_CtpD | -1.662 | -2.391 |
| H37Rv_KO_Rv1272 | 0.75 | 1.724 |
| H37Rv_KO_SugABC | -0.41 | 1.028 |
| H37Rv_KO_MbtN | -1.235 | -1.946 |
| Trans05 | 0.781 | 1.22 |
| macrophage_unactivated | 0.562 | -1.061 |
| IL1 | 0.747 | 0.472 |
| Rapamycin | -0.365 | -0.485 |
| Tcell | -0.453 | -0.723 |
| GMCSF | 0.359 | 0.0 |
| IFNab | 0.197 | -1.088 |
| IFNg | 0.15 | -1.903 |
| IFNg_GMCSF1 | 1.288 | 0.339 |
| Rv1432_day32 | 0.688 | 1.313 |
| Rv1565c_day32 | -0.073 | -0.509 |
| secA2_input | -0.357 | 1.069 |
| delta_Rv3594 | -1.245 | -0.737 |
| delta_Rv3717 | -0.736 | -0.781 |
| delta_Rv3811 | -1.805 | -1.05 |
| delta_Rv0954 | -0.898 | -2.142 |
| PonA1 | -1.874 | -0.815 |
| EccD1_KO | 1.036 | 1.151 |
| EspI_KO | 1.235 | 0.328 |
| PE35_KO | 0.604 | -0.271 |
| PPE68_KO | 1.465 | 0.0 |
| glycerol2 | 0.454 | 2.945 |
| lignocerate | 0.298 | 3.993 |
| oleate | 1.344 | -0.713 |
| phosphatidylcholine | 0.611 | 3.322 |
| acetate | 0.381 | 5.361 |
| glucAc | 0.056 | 4.14 |
| Rv0950ko | -0.893 | -0.416 |
| Rv1096ko | -1.065 | -0.85 |
| Rv3684ko | -1.156 | -0.612 |
| delta_otsA_trehalose | -0.609 | -0.694 |