TnSeqCorr

Top 10 genes with highest correlation to Rv1570/bioD:
none

Correlation of Rv1570/bioD with Rv1570/bioD

Normalized LFCs for Rv1570/bioD:
(description and provenance of datasets)
Rv1570/bioDRv1570/bioD
Fe_supp_jason_reseq

1.684

1.684

low_pH_jason_reseq

-2.652

-2.652

NO_jason_reseq

-3.654

-3.654

B6_jason_reseq

-2.946

-2.946

MHCII_jason_reseq

-1.847

-1.847

Isoniazid02

0.998

0.998

Rifampicin4

2.461

2.461

Ethambutol3

2.129

2.129

Meropenem3

1.024

1.024

Vancomycin16

1.735

1.735

Rv2680_day32

-2.353

-2.353

H37Rv_KO_MarP

0.344

0.344

hypoxia_3wks

0.0

0.0

hypoxia_6wks

-2.437

-2.437

glycerol

-6.0

-6.0

cholesterol

-5.315

-5.315

AJ

-6.0

-6.0

Bibs02

-6.0

-6.0

Bibs02c

-6.0

-6.0

BL6

-4.59

-4.59

BL6a

-6.0

-6.0

BXD01

-4.651

-4.651

BXD010

-4.7

-4.7

BXD011

-4.548

-4.548

BXD03

-4.962

-4.962

BXD04

-4.538

-4.538

BXD05

-4.683

-4.683

BXD06

-4.899

-4.899

BXD07

-4.818

-4.818

BXD08

-4.881

-4.881

BXD09

-5.157

-5.157

CAST

-6.0

-6.0

CCcont

-3.99

-3.99

DS01

-6.0

-6.0

DS02

-6.0

-6.0

DS04

-6.0

-6.0

DS0c

-6.0

-6.0

GP01

-3.353

-3.353

GP02

-3.053

-3.053

GP0c

-1.004

-1.004

NOD

-5.513

-5.513

NZO

-6.0

-6.0

PWK

-6.0

-6.0

H37Rv_KO_CtpC

-4.275

-4.275

H37Rv_KO_CtpD

-2.518

-2.518

H37Rv_KO_Rv1272

-5.176

-5.176

H37Rv_KO_SugABC

-3.364

-3.364

H37Rv_KO_MbtN

-2.007

-2.007

Trans05

-4.795

-4.795

macrophage_unactivated

0.78

0.78

IL1

-0.46

-0.46

Rapamycin

0.359

0.359

Tcell

-0.593

-0.593

GMCSF

0.0

0.0

IFNab

2.122

2.122

IFNg

0.374

0.374

IFNg_GMCSF1

-1.031

-1.031

Rv1432_day32

-5.532

-5.532

Rv1565c_day32

0.218

0.218

secA2_input

2.231

2.231

delta_Rv3594

0.262

0.262

delta_Rv3717

-0.415

-0.415

delta_Rv3811

-0.601

-0.601

delta_Rv0954

-1.137

-1.137

PonA1

0.764

0.764

EccD1_KO

0.247

0.247

EspI_KO

-1.061

-1.061

PE35_KO

0.965

0.965

PPE68_KO

-0.758

-0.758

glycerol2

0.0

0.0

lignocerate

0.0

0.0

oleate

0.0

0.0

phosphatidylcholine

0.0

0.0

acetate

0.0

0.0

glucAc

0.0

0.0

Rv0950ko

0.896

0.896

Rv1096ko

-0.467

-0.467

Rv3684ko

-0.039

-0.039

delta_otsA_trehalose

-0.378

-0.378