Top 10 genes with highest correlation to Rv1372/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2430c/PPE41 | (cc=0.5857) | info on Rv2430c/PPE41 |
| Rv1505c/- | (cc=0.5729) | info on Rv1505c/- |
| Rv1509/- | (cc=0.5593) | info on Rv1509/- |
| Rv2452c/- | (cc=0.5313) | info on Rv2452c/- |
| Rv0112/gca | (cc=0.5266) | info on Rv0112/gca |
| Rv2735c/- | (cc=0.5241) | info on Rv2735c/- |
| Rv0949/uvrD1 | (cc=0.5222) | info on Rv0949/uvrD1 |
| Rv1500/- | (cc=0.5179) | info on Rv1500/- |
| Rv2777c/- | (cc=0.5151) | info on Rv2777c/- |
| Rv1059/- | (cc=0.5131) | info on Rv1059/- |
Correlation of Rv1372/- with Rv2430c/PPE41
Normalized LFCs for Rv1372/-:
(description and provenance of datasets)
| Rv1372/- | Rv2430c/PPE41 | |
| Fe_supp_jason_reseq | 0.878 | -0.259 |
| low_pH_jason_reseq | -0.356 | -0.617 |
| NO_jason_reseq | -0.076 | -0.326 |
| B6_jason_reseq | -0.273 | -0.565 |
| MHCII_jason_reseq | 0.298 | -1.222 |
| Isoniazid02 | -0.038 | -0.362 |
| Rifampicin4 | -0.615 | -0.379 |
| Ethambutol3 | -0.098 | -0.539 |
| Meropenem3 | -0.425 | 0.604 |
| Vancomycin16 | 0.138 | -0.541 |
| Rv2680_day32 | 0.228 | -0.546 |
| H37Rv_KO_MarP | 0.121 | 0.78 |
| hypoxia_3wks | -0.227 | -0.016 |
| hypoxia_6wks | -1.027 | -0.558 |
| glycerol | -0.31 | -1.482 |
| cholesterol | 1.593 | -0.355 |
| AJ | 0.054 | 1.329 |
| Bibs02 | -0.331 | 0.293 |
| Bibs02c | 0.677 | -0.441 |
| BL6 | 0.814 | 2.014 |
| BL6a | 1.363 | 1.624 |
| BXD01 | 1.566 | 1.73 |
| BXD010 | 1.45 | 2.268 |
| BXD011 | 1.01 | 2.003 |
| BXD03 | 1.073 | 2.085 |
| BXD04 | 2.511 | 2.116 |
| BXD05 | 1.263 | 2.269 |
| BXD06 | 1.226 | 1.836 |
| BXD07 | 0.987 | 1.829 |
| BXD08 | 1.274 | 1.59 |
| BXD09 | 0.841 | 1.891 |
| CAST | 0.939 | 1.024 |
| CCcont | 0.894 | 1.659 |
| DS01 | 0.055 | 1.092 |
| DS02 | -0.723 | 0.558 |
| DS04 | 0.628 | 0.769 |
| DS0c | 0.379 | 0.509 |
| GP01 | 1.245 | 0.134 |
| GP02 | 1.917 | 2.462 |
| GP0c | 1.142 | 0.343 |
| NOD | 1.573 | 1.447 |
| NZO | 0.646 | 0.483 |
| PWK | 0.601 | 0.872 |
| H37Rv_KO_CtpC | 0.859 | 0.914 |
| H37Rv_KO_CtpD | 0.67 | 1.252 |
| H37Rv_KO_Rv1272 | 1.429 | 1.399 |
| H37Rv_KO_SugABC | -1.114 | 1.91 |
| H37Rv_KO_MbtN | -0.609 | 1.129 |
| Trans05 | 0.0 | 2.226 |
| macrophage_unactivated | 0.467 | 1.076 |
| IL1 | -0.489 | 0.125 |
| Rapamycin | 0.117 | 0.19 |
| Tcell | 0.867 | 0.094 |
| GMCSF | -0.267 | 0.636 |
| IFNab | -1.539 | 0.308 |
| IFNg | 0.347 | 0.537 |
| IFNg_GMCSF1 | 0.786 | 0.688 |
| Rv1432_day32 | -1.276 | -0.428 |
| Rv1565c_day32 | 0.706 | 0.782 |
| secA2_input | -1.722 | -0.891 |
| delta_Rv3594 | 0.748 | -0.571 |
| delta_Rv3717 | 0.0 | -1.178 |
| delta_Rv3811 | -0.407 | -0.265 |
| delta_Rv0954 | -1.088 | -1.172 |
| PonA1 | 0.717 | -0.066 |
| EccD1_KO | -0.214 | -0.625 |
| EspI_KO | -0.123 | -0.331 |
| PE35_KO | -0.061 | -0.726 |
| PPE68_KO | 0.198 | -0.701 |
| glycerol2 | -0.357 | -0.084 |
| lignocerate | -0.585 | -0.073 |
| oleate | -0.035 | 0.234 |
| phosphatidylcholine | -0.048 | 0.041 |
| acetate | -1.001 | 0.017 |
| glucAc | -0.975 | -0.627 |
| Rv0950ko | -0.398 | -0.136 |
| Rv1096ko | -1.252 | -0.22 |
| Rv3684ko | -0.242 | -0.508 |
| delta_otsA_trehalose | 1.429 | 1.428 |