Top 10 genes with highest correlation to Rv1366/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3749c/- | (cc=0.6056) | info on Rv3749c/- |
| Rv2078/- | (cc=0.5622) | info on Rv2078/- |
| Rv1913/- | (cc=0.5434) | info on Rv1913/- |
| Rv1013/pks16 | (cc=0.5409) | info on Rv1013/pks16 |
| Rv2287/yjcE | (cc=0.5232) | info on Rv2287/yjcE |
| Rv1751/- | (cc=0.5193) | info on Rv1751/- |
| Rv3697c/vapC48 | (cc=0.5103) | info on Rv3697c/vapC48 |
| Rv3819/- | (cc=0.4989) | info on Rv3819/- |
| Rv0226c/- | (cc=0.4983) | info on Rv0226c/- |
| Rv0235c/- | (cc=0.4943) | info on Rv0235c/- |
Correlation of Rv1366/- with Rv3749c/-
Normalized LFCs for Rv1366/-:
(description and provenance of datasets)
| Rv1366/- | Rv3749c/- | |
| Fe_supp_jason_reseq | -0.884 | 0.253 |
| low_pH_jason_reseq | -0.172 | -0.602 |
| NO_jason_reseq | -0.294 | 0.026 |
| B6_jason_reseq | -0.871 | 0.466 |
| MHCII_jason_reseq | -0.267 | 0.688 |
| Isoniazid02 | 0.148 | -0.227 |
| Rifampicin4 | -0.376 | 0.062 |
| Ethambutol3 | 0.269 | 0.136 |
| Meropenem3 | 0.237 | -0.904 |
| Vancomycin16 | 0.172 | -0.464 |
| Rv2680_day32 | -0.969 | -0.008 |
| H37Rv_KO_MarP | 0.518 | 0.429 |
| hypoxia_3wks | -0.235 | -0.1 |
| hypoxia_6wks | -0.048 | -0.098 |
| glycerol | -0.78 | -2.336 |
| cholesterol | -0.44 | -1.456 |
| AJ | 0.134 | 0.225 |
| Bibs02 | -0.823 | -0.535 |
| Bibs02c | 0.656 | 0.779 |
| BL6 | 0.376 | -0.411 |
| BL6a | 0.397 | 0.532 |
| BXD01 | 0.834 | -0.171 |
| BXD010 | 1.115 | 0.558 |
| BXD011 | 0.35 | -0.294 |
| BXD03 | -0.278 | -0.054 |
| BXD04 | 0.315 | -0.348 |
| BXD05 | 0.231 | 0.359 |
| BXD06 | 0.323 | -0.489 |
| BXD07 | 0.476 | -0.021 |
| BXD08 | 0.506 | -0.206 |
| BXD09 | -0.012 | -0.101 |
| CAST | -0.142 | 0.354 |
| CCcont | 0.646 | -0.373 |
| DS01 | 0.301 | -0.101 |
| DS02 | -0.254 | -0.487 |
| DS04 | 0.263 | -0.521 |
| DS0c | 0.525 | 0.193 |
| GP01 | 1.227 | 1.065 |
| GP02 | 1.296 | -0.271 |
| GP0c | 0.54 | -0.257 |
| NOD | 0.148 | 0.716 |
| NZO | 0.839 | 0.077 |
| PWK | 0.406 | 0.175 |
| H37Rv_KO_CtpC | 0.467 | -0.755 |
| H37Rv_KO_CtpD | -0.907 | -0.643 |
| H37Rv_KO_Rv1272 | 0.341 | -0.229 |
| H37Rv_KO_SugABC | 0.902 | -0.009 |
| H37Rv_KO_MbtN | 0.392 | -1.433 |
| Trans05 | 0.557 | -0.542 |
| macrophage_unactivated | 0.107 | -1.386 |
| IL1 | -0.739 | -5.09 |
| Rapamycin | -0.681 | -4.944 |
| Tcell | 0.694 | 2.366 |
| GMCSF | -1.117 | -4.267 |
| IFNab | -0.593 | -4.734 |
| IFNg | -1.384 | -4.479 |
| IFNg_GMCSF1 | -1.628 | -5.144 |
| Rv1432_day32 | -0.55 | 0.077 |
| Rv1565c_day32 | 0.175 | 0.18 |
| secA2_input | -0.188 | -0.941 |
| delta_Rv3594 | -0.249 | -0.393 |
| delta_Rv3717 | 0.371 | -0.339 |
| delta_Rv3811 | -0.665 | -0.082 |
| delta_Rv0954 | 0.813 | 0.141 |
| PonA1 | 0.726 | -0.029 |
| EccD1_KO | -0.276 | -0.428 |
| EspI_KO | 0.262 | -0.034 |
| PE35_KO | 0.379 | -0.604 |
| PPE68_KO | 0.534 | -0.877 |
| glycerol2 | 1.188 | 0.901 |
| lignocerate | 1.47 | 0.793 |
| oleate | 0.387 | 0.906 |
| phosphatidylcholine | 1.27 | 1.018 |
| acetate | 1.549 | 0.318 |
| glucAc | 1.226 | 0.22 |
| Rv0950ko | 0.856 | 0.356 |
| Rv1096ko | 0.32 | 0.425 |
| Rv3684ko | 0.534 | -0.016 |
| delta_otsA_trehalose | 1.077 | 1.092 |