Top 10 genes with highest correlation to Rv1346/mbtN:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0150c/- | (cc=0.4957) | info on Rv0150c/- |
| Rv2290/lppO | (cc=0.4787) | info on Rv2290/lppO |
| Rv1414/- | (cc=0.4645) | info on Rv1414/- |
| Rv0526/- | (cc=0.4628) | info on Rv0526/- |
| Rv0885/- | (cc=0.4615) | info on Rv0885/- |
| Rv0078/- | (cc=0.458) | info on Rv0078/- |
| Rv2639c/- | (cc=0.4537) | info on Rv2639c/- |
| Rv1970/lprM | (cc=0.4512) | info on Rv1970/lprM |
| Rv2570/- | (cc=0.4491) | info on Rv2570/- |
| Rv1101c/- | (cc=0.4471) | info on Rv1101c/- |
Correlation of Rv1346/mbtN with Rv0150c/-
Normalized LFCs for Rv1346/mbtN:
(description and provenance of datasets)
| Rv1346/mbtN | Rv0150c/- | |
| Fe_supp_jason_reseq | -0.054 | -0.369 |
| low_pH_jason_reseq | 0.5 | -0.254 |
| NO_jason_reseq | 3.171 | 0.53 |
| B6_jason_reseq | 0.191 | -1.11 |
| MHCII_jason_reseq | -0.326 | -0.503 |
| Isoniazid02 | -0.893 | -0.749 |
| Rifampicin4 | -0.276 | -0.133 |
| Ethambutol3 | -0.658 | -1.216 |
| Meropenem3 | -0.828 | -0.981 |
| Vancomycin16 | -0.223 | -0.13 |
| Rv2680_day32 | 0.218 | 0.0 |
| H37Rv_KO_MarP | -0.505 | -0.162 |
| hypoxia_3wks | 1.483 | -0.989 |
| hypoxia_6wks | 1.006 | -0.614 |
| glycerol | 0.0 | 0.094 |
| cholesterol | -0.823 | 0.867 |
| AJ | 0.259 | 0.309 |
| Bibs02 | 0.286 | -1.507 |
| Bibs02c | 0.558 | -1.325 |
| BL6 | -0.993 | -1.031 |
| BL6a | 1.224 | 1.934 |
| BXD01 | 0.347 | 0.376 |
| BXD010 | 1.051 | -0.269 |
| BXD011 | 1.427 | 0.829 |
| BXD03 | 1.313 | 0.123 |
| BXD04 | 0.937 | 1.184 |
| BXD05 | 1.862 | 1.154 |
| BXD06 | 1.883 | 1.029 |
| BXD07 | 1.015 | 0.587 |
| BXD08 | 0.128 | 1.485 |
| BXD09 | 0.97 | 1.146 |
| CAST | 0.15 | -0.484 |
| CCcont | -0.764 | -1.231 |
| DS01 | 0.893 | 0.0 |
| DS02 | 1.7 | 0.38 |
| DS04 | -0.606 | -0.408 |
| DS0c | 0.715 | -1.571 |
| GP01 | -0.142 | 1.035 |
| GP02 | 1.94 | 0.0 |
| GP0c | 1.272 | 1.592 |
| NOD | -0.239 | -0.9 |
| NZO | 1.058 | -0.199 |
| PWK | -0.172 | -0.786 |
| H37Rv_KO_CtpC | 1.642 | 0.347 |
| H37Rv_KO_CtpD | -0.395 | -1.044 |
| H37Rv_KO_Rv1272 | 0.91 | -0.666 |
| H37Rv_KO_SugABC | 1.583 | -0.817 |
| H37Rv_KO_MbtN | -1.116 | -0.653 |
| Trans05 | 1.26 | 3.054 |
| macrophage_unactivated | -1.461 | 0.947 |
| IL1 | 0.801 | 1.02 |
| Rapamycin | -0.178 | -2.584 |
| Tcell | -0.433 | -1.118 |
| GMCSF | 0.774 | 0.671 |
| IFNab | 0.562 | 0.399 |
| IFNg | 0.0 | 1.2 |
| IFNg_GMCSF1 | 0.735 | 0.085 |
| Rv1432_day32 | 1.455 | 0.0 |
| Rv1565c_day32 | 0.64 | -0.665 |
| secA2_input | -0.65 | -1.476 |
| delta_Rv3594 | 0.595 | 3.009 |
| delta_Rv3717 | 0.506 | 3.934 |
| delta_Rv3811 | 1.034 | 3.069 |
| delta_Rv0954 | 0.618 | 4.343 |
| PonA1 | 0.17 | -0.159 |
| EccD1_KO | 0.957 | 1.924 |
| EspI_KO | 0.18 | 0.0 |
| PE35_KO | 0.694 | 0.589 |
| PPE68_KO | 1.152 | -0.237 |
| glycerol2 | -1.712 | -3.077 |
| lignocerate | -1.695 | -2.534 |
| oleate | 0.186 | -3.113 |
| phosphatidylcholine | -1.188 | -3.444 |
| acetate | -1.342 | -4.088 |
| glucAc | -1.569 | -2.542 |
| Rv0950ko | -0.06 | 0.289 |
| Rv1096ko | 0.802 | 0.561 |
| Rv3684ko | 0.124 | 0.314 |
| delta_otsA_trehalose | 0.4 | 0.0 |