Top 10 genes with highest correlation to Rv1334/mec:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1336/cysM | (cc=0.8246) | info on Rv1336/cysM |
| Rv1337/- | (cc=0.7723) | info on Rv1337/- |
| Rv1333/- | (cc=0.7033) | info on Rv1333/- |
| Rv1335/cysO | (cc=0.6962) | info on Rv1335/cysO |
| Rv3842c/glpQ1 | (cc=0.6651) | info on Rv3842c/glpQ1 |
| Rv2721c/- | (cc=0.6386) | info on Rv2721c/- |
| Rv3050c/- | (cc=0.6075) | info on Rv3050c/- |
| Rv0153c/ptbB | (cc=0.5919) | info on Rv0153c/ptbB |
| Rv0644c/mmaA2 | (cc=0.5877) | info on Rv0644c/mmaA2 |
| Rv1341/- | (cc=0.5705) | info on Rv1341/- |
Correlation of Rv1334/mec with Rv1336/cysM
Normalized LFCs for Rv1334/mec:
(description and provenance of datasets)
| Rv1334/mec | Rv1336/cysM | |
| Fe_supp_jason_reseq | -1.481 | 0.199 |
| low_pH_jason_reseq | -0.197 | 0.831 |
| NO_jason_reseq | 1.011 | 1.113 |
| B6_jason_reseq | -0.525 | 0.705 |
| MHCII_jason_reseq | -0.587 | -0.079 |
| Isoniazid02 | 1.746 | 1.385 |
| Rifampicin4 | 0.127 | 0.076 |
| Ethambutol3 | 0.078 | -0.593 |
| Meropenem3 | 0.642 | 0.628 |
| Vancomycin16 | 1.117 | 0.666 |
| Rv2680_day32 | 0.825 | 0.675 |
| H37Rv_KO_MarP | 0.268 | -0.425 |
| hypoxia_3wks | 1.826 | 2.213 |
| hypoxia_6wks | 2.462 | 4.042 |
| glycerol | 0.057 | -0.967 |
| cholesterol | 0.261 | 0.048 |
| AJ | -0.324 | -1.56 |
| Bibs02 | -0.542 | -1.444 |
| Bibs02c | 0.597 | -1.203 |
| BL6 | 0.722 | 1.43 |
| BL6a | 1.194 | 1.05 |
| BXD01 | 1.351 | 2.221 |
| BXD010 | 1.985 | 1.974 |
| BXD011 | 2.172 | 3.102 |
| BXD03 | 0.748 | 1.156 |
| BXD04 | 1.201 | 1.994 |
| BXD05 | 1.843 | 1.724 |
| BXD06 | 1.645 | 2.328 |
| BXD07 | 1.663 | 2.6 |
| BXD08 | 1.376 | 2.71 |
| BXD09 | 1.363 | 1.771 |
| CAST | -0.813 | -0.594 |
| CCcont | -0.134 | 0.248 |
| DS01 | -0.987 | -1.632 |
| DS02 | -1.089 | -1.306 |
| DS04 | -0.523 | -0.136 |
| DS0c | -0.137 | -1.194 |
| GP01 | 0.192 | 1.134 |
| GP02 | 0.74 | 0.251 |
| GP0c | 1.04 | 1.595 |
| NOD | 0.151 | -1.128 |
| NZO | 0.325 | 0.23 |
| PWK | -0.176 | -0.469 |
| H37Rv_KO_CtpC | -0.648 | -0.578 |
| H37Rv_KO_CtpD | -0.362 | 0.006 |
| H37Rv_KO_Rv1272 | 0.7 | 1.298 |
| H37Rv_KO_SugABC | 1.725 | 0.836 |
| H37Rv_KO_MbtN | 1.499 | 2.209 |
| Trans05 | 0.873 | 1.733 |
| macrophage_unactivated | -2.108 | -2.061 |
| IL1 | 1.356 | -0.163 |
| Rapamycin | -0.384 | -0.915 |
| Tcell | -0.609 | 0.29 |
| GMCSF | -1.04 | -1.428 |
| IFNab | 0.46 | 0.115 |
| IFNg | 0.182 | -0.901 |
| IFNg_GMCSF1 | 0.053 | -1.024 |
| Rv1432_day32 | 0.245 | 0.846 |
| Rv1565c_day32 | -0.828 | -1.439 |
| secA2_input | 0.204 | 0.227 |
| delta_Rv3594 | 0.704 | 0.858 |
| delta_Rv3717 | 2.015 | 2.129 |
| delta_Rv3811 | 1.691 | 1.103 |
| delta_Rv0954 | -0.207 | -0.291 |
| PonA1 | -0.103 | -0.995 |
| EccD1_KO | -0.957 | 0.22 |
| EspI_KO | -1.001 | 0.088 |
| PE35_KO | -1.149 | -0.715 |
| PPE68_KO | -1.085 | 0.016 |
| glycerol2 | -0.82 | -0.206 |
| lignocerate | -2.169 | -2.133 |
| oleate | 1.965 | 2.606 |
| phosphatidylcholine | -1.476 | -1.732 |
| acetate | -0.755 | -0.073 |
| glucAc | -0.862 | -0.255 |
| Rv0950ko | -0.473 | -0.633 |
| Rv1096ko | 0.03 | -0.305 |
| Rv3684ko | 0.321 | 0.308 |
| delta_otsA_trehalose | 0.117 | -0.053 |