Top 10 genes with highest correlation to Rv1243c/PE_PGRS23:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1840c/PE_PGRS34 | (cc=0.5792) | info on Rv1840c/PE_PGRS34 |
| Rv3729/- | (cc=0.5388) | info on Rv3729/- |
| Rv2016/- | (cc=0.5131) | info on Rv2016/- |
| Rv3297/nei | (cc=0.4979) | info on Rv3297/nei |
| Rv0532/PE_PGRS6 | (cc=0.4929) | info on Rv0532/PE_PGRS6 |
| Rv0536/galE3 | (cc=0.4881) | info on Rv0536/galE3 |
| Rv2333c/stp | (cc=0.4848) | info on Rv2333c/stp |
| Rv3590c/PE_PGRS58 | (cc=0.4774) | info on Rv3590c/PE_PGRS58 |
| Rv1632c/- | (cc=0.4766) | info on Rv1632c/- |
| Rv2059/- | (cc=0.4748) | info on Rv2059/- |
Correlation of Rv1243c/PE_PGRS23 with Rv1840c/PE_PGRS34
Normalized LFCs for Rv1243c/PE_PGRS23:
(description and provenance of datasets)
| Rv1243c/PE_PGRS23 | Rv1840c/PE_PGRS34 | |
| Fe_supp_jason_reseq | -0.655 | -0.601 |
| low_pH_jason_reseq | -0.264 | 0.356 |
| NO_jason_reseq | -0.415 | -0.226 |
| B6_jason_reseq | -0.422 | -0.581 |
| MHCII_jason_reseq | 0.294 | 1.132 |
| Isoniazid02 | 1.695 | 0.851 |
| Rifampicin4 | 1.015 | 1.949 |
| Ethambutol3 | 2.081 | 0.996 |
| Meropenem3 | 0.695 | 1.01 |
| Vancomycin16 | 0.963 | 0.899 |
| Rv2680_day32 | 1.351 | -0.239 |
| H37Rv_KO_MarP | 0.308 | -0.151 |
| hypoxia_3wks | -0.829 | -1.38 |
| hypoxia_6wks | -1.084 | -1.345 |
| glycerol | -0.376 | -0.085 |
| cholesterol | -0.152 | -0.49 |
| AJ | 0.402 | 0.761 |
| Bibs02 | 0.514 | 0.889 |
| Bibs02c | 0.265 | 0.687 |
| BL6 | -0.69 | -1.131 |
| BL6a | -0.354 | -0.083 |
| BXD01 | -0.503 | -0.256 |
| BXD010 | -0.584 | -0.859 |
| BXD011 | -0.822 | -1.237 |
| BXD03 | -0.177 | -1.222 |
| BXD04 | 0.163 | -0.088 |
| BXD05 | 0.157 | -0.116 |
| BXD06 | -0.386 | -1.444 |
| BXD07 | -0.547 | -0.79 |
| BXD08 | -0.276 | -0.197 |
| BXD09 | -0.693 | -0.77 |
| CAST | -0.334 | -0.304 |
| CCcont | -0.669 | -0.963 |
| DS01 | -0.455 | 0.157 |
| DS02 | 0.161 | 0.173 |
| DS04 | 0.256 | 0.713 |
| DS0c | -0.358 | 0.482 |
| GP01 | 0.463 | 0.849 |
| GP02 | 1.47 | 0.055 |
| GP0c | 0.0 | 0.23 |
| NOD | 0.215 | 0.207 |
| NZO | 0.147 | 0.027 |
| PWK | 0.415 | 0.392 |
| H37Rv_KO_CtpC | -0.384 | -0.459 |
| H37Rv_KO_CtpD | 0.801 | 0.051 |
| H37Rv_KO_Rv1272 | 0.41 | -0.708 |
| H37Rv_KO_SugABC | -0.718 | -0.864 |
| H37Rv_KO_MbtN | -1.036 | 0.455 |
| Trans05 | -0.12 | -0.193 |
| macrophage_unactivated | -0.218 | -0.186 |
| IL1 | -0.647 | -0.418 |
| Rapamycin | 0.129 | -0.181 |
| Tcell | -0.401 | -0.531 |
| GMCSF | 0.71 | 0.341 |
| IFNab | -0.429 | -1.046 |
| IFNg | -0.38 | 0.0 |
| IFNg_GMCSF1 | -0.273 | -0.314 |
| Rv1432_day32 | -0.037 | 0.103 |
| Rv1565c_day32 | -0.46 | -0.779 |
| secA2_input | -0.108 | -1.395 |
| delta_Rv3594 | -0.21 | -0.136 |
| delta_Rv3717 | 0.237 | 0.224 |
| delta_Rv3811 | -0.391 | 0.33 |
| delta_Rv0954 | -0.279 | 1.106 |
| PonA1 | 0.78 | 0.388 |
| EccD1_KO | 0.849 | 0.474 |
| EspI_KO | -0.16 | -0.411 |
| PE35_KO | -0.508 | -0.467 |
| PPE68_KO | -0.659 | 0.374 |
| glycerol2 | -0.181 | -0.65 |
| lignocerate | 0.505 | 0.426 |
| oleate | -0.608 | -1.131 |
| phosphatidylcholine | 0.13 | 0.193 |
| acetate | 0.549 | 0.973 |
| glucAc | 0.892 | 1.106 |
| Rv0950ko | -0.721 | -0.211 |
| Rv1096ko | -0.256 | -0.603 |
| Rv3684ko | -0.645 | -0.347 |
| delta_otsA_trehalose | -1.731 | 0.497 |