Top 10 genes with highest correlation to Rv1209/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0051/- | (cc=0.651) | info on Rv0051/- |
| Rv1072/- | (cc=0.596) | info on Rv1072/- |
| Rv0563/htpX | (cc=0.5735) | info on Rv0563/htpX |
| Rv3689/- | (cc=0.5417) | info on Rv3689/- |
| Rv1116/- | (cc=0.5249) | info on Rv1116/- |
| Rv2243/fabD | (cc=0.5217) | info on Rv2243/fabD |
| Rv3842c/glpQ1 | (cc=0.516) | info on Rv3842c/glpQ1 |
| Rv3419c/gcp | (cc=0.5094) | info on Rv3419c/gcp |
| Rv3157/nuoM | (cc=0.5031) | info on Rv3157/nuoM |
| Rv3378c/- | (cc=0.499) | info on Rv3378c/- |
Correlation of Rv1209/- with Rv0051/-
Normalized LFCs for Rv1209/-:
(description and provenance of datasets)
| Rv1209/- | Rv0051/- | |
| Fe_supp_jason_reseq | -0.846 | 0.14 |
| low_pH_jason_reseq | -0.07 | 0.149 |
| NO_jason_reseq | 0.969 | 0.0 |
| B6_jason_reseq | -0.636 | 1.307 |
| MHCII_jason_reseq | -1.561 | -0.538 |
| Isoniazid02 | -1.781 | -1.566 |
| Rifampicin4 | -1.259 | -0.422 |
| Ethambutol3 | 3.384 | 4.091 |
| Meropenem3 | 0.305 | 1.678 |
| Vancomycin16 | -1.279 | -0.255 |
| Rv2680_day32 | -2.014 | -0.864 |
| H37Rv_KO_MarP | -2.489 | -1.266 |
| hypoxia_3wks | 0.722 | 0.187 |
| hypoxia_6wks | 1.293 | 0.121 |
| glycerol | -0.228 | 0.124 |
| cholesterol | -0.86 | -0.162 |
| AJ | -1.205 | -0.049 |
| Bibs02 | 0.336 | -0.531 |
| Bibs02c | 0.732 | -1.285 |
| BL6 | 2.139 | 1.125 |
| BL6a | 1.037 | 0.703 |
| BXD01 | 1.443 | 1.147 |
| BXD010 | 0.774 | 1.062 |
| BXD011 | 1.689 | 0.81 |
| BXD03 | 1.236 | 1.433 |
| BXD04 | 1.935 | 1.971 |
| BXD05 | 0.428 | 1.161 |
| BXD06 | 1.397 | 1.435 |
| BXD07 | 1.51 | 1.358 |
| BXD08 | 1.642 | 1.226 |
| BXD09 | 0.4 | 0.715 |
| CAST | 0.46 | 0.868 |
| CCcont | 1.11 | 0.759 |
| DS01 | -1.107 | -1.406 |
| DS02 | 0.014 | -0.788 |
| DS04 | -0.074 | -0.791 |
| DS0c | -0.468 | -0.541 |
| GP01 | 0.816 | 0.651 |
| GP02 | 0.413 | -0.612 |
| GP0c | 1.727 | -0.027 |
| NOD | -0.451 | 1.067 |
| NZO | -0.143 | 0.536 |
| PWK | 1.287 | 1.38 |
| H37Rv_KO_CtpC | -1.157 | 0.526 |
| H37Rv_KO_CtpD | -1.588 | -1.495 |
| H37Rv_KO_Rv1272 | 0.739 | -0.763 |
| H37Rv_KO_SugABC | 0.813 | -0.054 |
| H37Rv_KO_MbtN | 0.232 | 0.104 |
| Trans05 | 0.327 | 0.251 |
| macrophage_unactivated | -1.032 | -0.846 |
| IL1 | -0.323 | 0.0 |
| Rapamycin | -0.721 | -0.675 |
| Tcell | 0.163 | -0.297 |
| GMCSF | -1.843 | -0.378 |
| IFNab | -0.112 | 0.16 |
| IFNg | 0.16 | -0.323 |
| IFNg_GMCSF1 | -1.128 | -0.333 |
| Rv1432_day32 | -0.433 | -0.117 |
| Rv1565c_day32 | -2.334 | -0.782 |
| secA2_input | 0.639 | 0.476 |
| delta_Rv3594 | -1.686 | -0.95 |
| delta_Rv3717 | -1.759 | -0.482 |
| delta_Rv3811 | -1.422 | -0.791 |
| delta_Rv0954 | -1.728 | -0.876 |
| PonA1 | -2.563 | 0.703 |
| EccD1_KO | 0.431 | -0.71 |
| EspI_KO | -0.123 | -0.787 |
| PE35_KO | 0.403 | -1.272 |
| PPE68_KO | 1.28 | -0.246 |
| glycerol2 | -0.696 | -0.206 |
| lignocerate | -1.173 | -0.242 |
| oleate | 0.647 | 0.033 |
| phosphatidylcholine | -0.44 | -0.279 |
| acetate | -0.474 | -0.181 |
| glucAc | -0.521 | -0.099 |
| Rv0950ko | 1.098 | 0.314 |
| Rv1096ko | 1.414 | 1.764 |
| Rv3684ko | 1.778 | 1.346 |
| delta_otsA_trehalose | 2.47 | 0.503 |