Top 10 genes with highest correlation to Rv1164/narI:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0333/- | (cc=0.5361) | info on Rv0333/- |
| Rv1482c/- | (cc=0.5358) | info on Rv1482c/- |
| Rv1215c/- | (cc=0.4841) | info on Rv1215c/- |
| Rv2504c/scoA | (cc=0.4741) | info on Rv2504c/scoA |
| Rv0671/lpqP | (cc=0.4612) | info on Rv0671/lpqP |
| Rv0418/lpqL | (cc=0.4505) | info on Rv0418/lpqL |
| Rv2643/arsC | (cc=0.4447) | info on Rv2643/arsC |
| Rv3310/sapM | (cc=0.4414) | info on Rv3310/sapM |
| Rv2389c/rpfD | (cc=0.4373) | info on Rv2389c/rpfD |
| Rv3238c/- | (cc=0.4321) | info on Rv3238c/- |
Correlation of Rv1164/narI with Rv0333/-
Normalized LFCs for Rv1164/narI:
(description and provenance of datasets)
| Rv1164/narI | Rv0333/- | |
| Fe_supp_jason_reseq | 0.366 | 0.118 |
| low_pH_jason_reseq | -0.547 | -1.261 |
| NO_jason_reseq | 0.105 | -0.389 |
| B6_jason_reseq | -1.121 | 1.124 |
| MHCII_jason_reseq | -0.146 | 0.143 |
| Isoniazid02 | -0.154 | 1.398 |
| Rifampicin4 | -0.087 | -0.853 |
| Ethambutol3 | 1.415 | 1.0 |
| Meropenem3 | 3.012 | 4.998 |
| Vancomycin16 | -0.106 | -0.048 |
| Rv2680_day32 | 0.145 | 0.23 |
| H37Rv_KO_MarP | 0.588 | -0.896 |
| hypoxia_3wks | 0.502 | -0.203 |
| hypoxia_6wks | 0.111 | 0.282 |
| glycerol | -0.633 | -0.622 |
| cholesterol | -0.141 | 0.222 |
| AJ | 0.879 | -0.419 |
| Bibs02 | 0.281 | 1.237 |
| Bibs02c | -0.056 | -0.105 |
| BL6 | -0.306 | 0.642 |
| BL6a | 0.382 | -0.313 |
| BXD01 | -0.297 | -1.937 |
| BXD010 | 0.261 | -2.664 |
| BXD011 | 0.144 | -0.342 |
| BXD03 | -0.275 | -1.814 |
| BXD04 | -0.492 | -0.905 |
| BXD05 | 0.282 | -0.167 |
| BXD06 | -0.101 | -0.678 |
| BXD07 | 0.097 | -0.613 |
| BXD08 | 0.369 | 0.204 |
| BXD09 | 0.116 | -1.128 |
| CAST | 0.0 | -0.746 |
| CCcont | -0.188 | -0.891 |
| DS01 | -0.096 | 0.121 |
| DS02 | -0.34 | -0.269 |
| DS04 | 0.406 | 0.842 |
| DS0c | 0.085 | -0.49 |
| GP01 | 0.591 | -0.205 |
| GP02 | 0.459 | 0.563 |
| GP0c | -0.635 | -0.613 |
| NOD | -0.138 | -0.249 |
| NZO | -0.179 | 0.426 |
| PWK | -0.162 | 0.776 |
| H37Rv_KO_CtpC | 1.16 | 0.201 |
| H37Rv_KO_CtpD | 0.05 | -2.441 |
| H37Rv_KO_Rv1272 | 0.028 | -1.764 |
| H37Rv_KO_SugABC | 1.027 | 0.934 |
| H37Rv_KO_MbtN | -0.085 | -2.144 |
| Trans05 | -0.108 | -0.917 |
| macrophage_unactivated | -0.025 | 0.186 |
| IL1 | -0.113 | 0.905 |
| Rapamycin | 0.442 | 1.01 |
| Tcell | -0.388 | -0.951 |
| GMCSF | 0.811 | 0.673 |
| IFNab | 0.435 | 0.2 |
| IFNg | 0.633 | 0.492 |
| IFNg_GMCSF1 | -0.27 | -0.047 |
| Rv1432_day32 | -0.017 | 2.117 |
| Rv1565c_day32 | 0.477 | 0.006 |
| secA2_input | -0.225 | 0.485 |
| delta_Rv3594 | -1.014 | -2.109 |
| delta_Rv3717 | -1.274 | -1.453 |
| delta_Rv3811 | -1.06 | -0.995 |
| delta_Rv0954 | -0.337 | -1.093 |
| PonA1 | -1.005 | -0.723 |
| EccD1_KO | 0.855 | 0.569 |
| EspI_KO | 0.568 | 1.554 |
| PE35_KO | 0.373 | -0.359 |
| PPE68_KO | 0.589 | 0.797 |
| glycerol2 | -0.035 | -0.59 |
| lignocerate | 0.086 | -0.022 |
| oleate | 0.542 | 0.051 |
| phosphatidylcholine | 0.266 | 0.148 |
| acetate | -0.241 | 1.303 |
| glucAc | -0.187 | -0.314 |
| Rv0950ko | 0.163 | 0.181 |
| Rv1096ko | 0.299 | 0.884 |
| Rv3684ko | -0.635 | 0.842 |
| delta_otsA_trehalose | -0.57 | -1.479 |