Top 10 genes with highest correlation to Rv1123c/bpoB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2306B/- | (cc=0.6083) | info on Rv2306B/- |
| Rv1939/- | (cc=0.5179) | info on Rv1939/- |
| Rv2874/dipZ | (cc=0.4985) | info on Rv2874/dipZ |
| Rv0936/pstA2 | (cc=0.4918) | info on Rv0936/pstA2 |
| Rv2980/- | (cc=0.4728) | info on Rv2980/- |
| Rv1608c/bcpB | (cc=0.4712) | info on Rv1608c/bcpB |
| Rv1270c/lprA | (cc=0.4606) | info on Rv1270c/lprA |
| Rv0840c/pip | (cc=0.4531) | info on Rv0840c/pip |
| Rv2130c/mshC | (cc=0.4504) | info on Rv2130c/mshC |
| Rv2484c/- | (cc=0.4478) | info on Rv2484c/- |
Correlation of Rv1123c/bpoB with Rv2306B/-
Normalized LFCs for Rv1123c/bpoB:
(description and provenance of datasets)
| Rv1123c/bpoB | Rv2306B/- | |
| Fe_supp_jason_reseq | 0.897 | 1.468 |
| low_pH_jason_reseq | -0.882 | -0.656 |
| NO_jason_reseq | 0.42 | 0.344 |
| B6_jason_reseq | 1.537 | 1.389 |
| MHCII_jason_reseq | 1.134 | 0.455 |
| Isoniazid02 | 1.686 | 0.604 |
| Rifampicin4 | -0.596 | 0.699 |
| Ethambutol3 | 1.143 | 0.226 |
| Meropenem3 | -0.108 | 0.131 |
| Vancomycin16 | 0.403 | 1.318 |
| Rv2680_day32 | -0.496 | 0.267 |
| H37Rv_KO_MarP | 0.051 | 0.023 |
| hypoxia_3wks | -0.307 | 0.638 |
| hypoxia_6wks | -0.355 | 1.28 |
| glycerol | -0.481 | -0.554 |
| cholesterol | -0.697 | -0.643 |
| AJ | -0.452 | 0.091 |
| Bibs02 | 1.013 | -1.763 |
| Bibs02c | 0.062 | 0.499 |
| BL6 | -0.306 | -0.53 |
| BL6a | -0.446 | -0.613 |
| BXD01 | -0.176 | -0.978 |
| BXD010 | -0.265 | -1.821 |
| BXD011 | -0.129 | -1.145 |
| BXD03 | -0.506 | -0.395 |
| BXD04 | -0.445 | -0.683 |
| BXD05 | -1.228 | -2.755 |
| BXD06 | -1.009 | -0.737 |
| BXD07 | -0.499 | -0.332 |
| BXD08 | 0.218 | -0.796 |
| BXD09 | -0.734 | -0.29 |
| CAST | -0.352 | -0.127 |
| CCcont | -1.258 | -0.021 |
| DS01 | -0.024 | 0.686 |
| DS02 | -1.136 | -0.246 |
| DS04 | -1.2 | -0.566 |
| DS0c | -0.517 | 0.841 |
| GP01 | -0.507 | -1.931 |
| GP02 | -0.664 | -1.275 |
| GP0c | -1.526 | -1.254 |
| NOD | 0.464 | -1.045 |
| NZO | -0.328 | -1.611 |
| PWK | -0.102 | 0.053 |
| H37Rv_KO_CtpC | -1.35 | -1.623 |
| H37Rv_KO_CtpD | -0.302 | -2.477 |
| H37Rv_KO_Rv1272 | -0.448 | -2.246 |
| H37Rv_KO_SugABC | 0.318 | 1.092 |
| H37Rv_KO_MbtN | 0.368 | -0.641 |
| Trans05 | -1.554 | -0.813 |
| macrophage_unactivated | 0.518 | 2.301 |
| IL1 | 0.03 | -1.308 |
| Rapamycin | 0.531 | -0.626 |
| Tcell | 0.384 | -1.111 |
| GMCSF | 0.211 | -1.595 |
| IFNab | -0.094 | -0.484 |
| IFNg | 0.134 | 1.211 |
| IFNg_GMCSF1 | 1.351 | 0.233 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 1.829 | 0.716 |
| secA2_input | 0.828 | -0.235 |
| delta_Rv3594 | -1.215 | -1.037 |
| delta_Rv3717 | -0.871 | -0.96 |
| delta_Rv3811 | -0.803 | -0.947 |
| delta_Rv0954 | -1.225 | -2.222 |
| PonA1 | -1.35 | -4.022 |
| EccD1_KO | 1.184 | 3.111 |
| EspI_KO | 0.465 | 2.618 |
| PE35_KO | 2.345 | 4.623 |
| PPE68_KO | 2.572 | 5.238 |
| glycerol2 | -1.621 | -1.003 |
| lignocerate | -0.533 | 0.972 |
| oleate | -0.647 | -1.509 |
| phosphatidylcholine | -0.563 | 0.0 |
| acetate | 0.066 | 2.803 |
| glucAc | -0.654 | 1.681 |
| Rv0950ko | -0.482 | -0.407 |
| Rv1096ko | -0.329 | -0.48 |
| Rv3684ko | 0.403 | 2.256 |
| delta_otsA_trehalose | -0.257 | 0.739 |