Top 10 genes with highest correlation to Rv1100/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1072/- | (cc=0.6954) | info on Rv1072/- |
| Rv0508/- | (cc=0.6165) | info on Rv0508/- |
| Rv2793c/truB | (cc=0.6093) | info on Rv2793c/truB |
| Rv1239c/corA | (cc=0.6074) | info on Rv1239c/corA |
| Rv3419c/gcp | (cc=0.6069) | info on Rv3419c/gcp |
| Rv2206/- | (cc=0.5876) | info on Rv2206/- |
| Rv0668/rpoC | (cc=0.5764) | info on Rv0668/rpoC |
| Rv1712/cmk | (cc=0.57) | info on Rv1712/cmk |
| Rv2567/- | (cc=0.5514) | info on Rv2567/- |
| Rv0930/pstA1 | (cc=0.547) | info on Rv0930/pstA1 |
Correlation of Rv1100/- with Rv1072/-
Normalized LFCs for Rv1100/-:
(description and provenance of datasets)
| Rv1100/- | Rv1072/- | |
| Fe_supp_jason_reseq | 0.071 | 3.452 |
| low_pH_jason_reseq | 4.725 | 0.709 |
| NO_jason_reseq | -0.536 | -0.205 |
| B6_jason_reseq | 0.163 | 1.58 |
| MHCII_jason_reseq | -2.608 | 0.0 |
| Isoniazid02 | -1.924 | -2.007 |
| Rifampicin4 | 1.313 | -0.653 |
| Ethambutol3 | 3.677 | 3.263 |
| Meropenem3 | 0.217 | 0.586 |
| Vancomycin16 | 0.151 | -0.727 |
| Rv2680_day32 | -0.057 | -0.803 |
| H37Rv_KO_MarP | -2.534 | -2.718 |
| hypoxia_3wks | -3.114 | 0.0 |
| hypoxia_6wks | -0.409 | 1.451 |
| glycerol | 0.462 | 0.089 |
| cholesterol | -0.628 | -1.261 |
| AJ | -1.548 | 0.948 |
| Bibs02 | 0.477 | 0.747 |
| Bibs02c | 0.9 | 0.653 |
| BL6 | 1.547 | 2.081 |
| BL6a | 1.314 | 1.728 |
| BXD01 | 2.85 | 3.146 |
| BXD010 | 2.169 | 2.277 |
| BXD011 | 2.573 | 3.036 |
| BXD03 | 1.751 | 2.899 |
| BXD04 | 4.268 | 5.696 |
| BXD05 | 2.301 | 2.5 |
| BXD06 | 3.125 | 2.909 |
| BXD07 | 2.398 | 2.518 |
| BXD08 | 2.205 | 3.668 |
| BXD09 | 2.056 | 1.736 |
| CAST | 1.844 | 4.513 |
| CCcont | 0.927 | 2.429 |
| DS01 | 0.89 | 0.965 |
| DS02 | 1.419 | 0.821 |
| DS04 | 1.029 | 0.793 |
| DS0c | 1.347 | 0.748 |
| GP01 | -0.554 | 0.0 |
| GP02 | -0.086 | -0.166 |
| GP0c | -0.603 | -0.26 |
| NOD | 0.405 | 1.87 |
| NZO | -0.25 | 0.815 |
| PWK | 1.742 | 2.865 |
| H37Rv_KO_CtpC | 3.317 | 3.557 |
| H37Rv_KO_CtpD | 0.942 | 1.054 |
| H37Rv_KO_Rv1272 | -0.791 | 1.837 |
| H37Rv_KO_SugABC | 0.4 | 1.948 |
| H37Rv_KO_MbtN | 1.323 | 2.179 |
| Trans05 | -0.254 | 2.15 |
| macrophage_unactivated | -1.348 | -1.13 |
| IL1 | -0.525 | -1.949 |
| Rapamycin | -1.547 | -2.961 |
| Tcell | 2.545 | 1.466 |
| GMCSF | -0.412 | -1.191 |
| IFNab | -2.304 | 0.0 |
| IFNg | 0.508 | -1.756 |
| IFNg_GMCSF1 | -0.49 | -0.465 |
| Rv1432_day32 | 0.0 | -0.887 |
| Rv1565c_day32 | -0.782 | 0.401 |
| secA2_input | 0.178 | 1.079 |
| delta_Rv3594 | -1.877 | -0.846 |
| delta_Rv3717 | -1.65 | -2.079 |
| delta_Rv3811 | -1.196 | -0.717 |
| delta_Rv0954 | -1.523 | -2.135 |
| PonA1 | -0.463 | -1.272 |
| EccD1_KO | 0.474 | 1.312 |
| EspI_KO | -0.707 | 1.041 |
| PE35_KO | -1.138 | 0.306 |
| PPE68_KO | -1.494 | 0.653 |
| glycerol2 | -3.224 | -0.451 |
| lignocerate | -1.095 | -0.897 |
| oleate | -3.756 | -0.588 |
| phosphatidylcholine | -1.315 | -1.207 |
| acetate | 0.69 | -0.535 |
| glucAc | 0.736 | 0.554 |
| Rv0950ko | -0.075 | 0.28 |
| Rv1096ko | 1.484 | 2.524 |
| Rv3684ko | -0.419 | 2.6 |
| delta_otsA_trehalose | -0.391 | -1.013 |