Top 10 genes with highest correlation to Rv1090/celA2b:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2018/- | (cc=0.3779) | info on Rv2018/- |
| Rv3722c/- | (cc=0.3621) | info on Rv3722c/- |
| Rv0481c/- | (cc=0.3569) | info on Rv0481c/- |
| Rv0237/lpqI | (cc=0.3504) | info on Rv0237/lpqI |
| Rv3858c/gltD | (cc=0.3468) | info on Rv3858c/gltD |
| Rv3776/- | (cc=0.3446) | info on Rv3776/- |
| Rv2678c/hemE | (cc=0.338) | info on Rv2678c/hemE |
| Rv3889c/espG2 | (cc=0.3377) | info on Rv3889c/espG2 |
| Rv1095/phoH2 | (cc=0.337) | info on Rv1095/phoH2 |
| Rv2611c/- | (cc=0.3331) | info on Rv2611c/- |
Correlation of Rv1090/celA2b with Rv2018/-
Normalized LFCs for Rv1090/celA2b:
(description and provenance of datasets)
| Rv1090/celA2b | Rv2018/- | |
| Fe_supp_jason_reseq | -0.505 | 0.169 |
| low_pH_jason_reseq | 0.611 | -0.634 |
| NO_jason_reseq | -0.129 | 0.541 |
| B6_jason_reseq | -0.249 | -0.421 |
| MHCII_jason_reseq | 1.44 | 1.899 |
| Isoniazid02 | -0.191 | -0.69 |
| Rifampicin4 | -0.114 | -1.072 |
| Ethambutol3 | 0.085 | 0.734 |
| Meropenem3 | 0.157 | -0.302 |
| Vancomycin16 | -0.244 | -0.854 |
| Rv2680_day32 | -0.454 | 0.0 |
| H37Rv_KO_MarP | 0.066 | -0.476 |
| hypoxia_3wks | -0.096 | -0.821 |
| hypoxia_6wks | -0.136 | -0.209 |
| glycerol | 0.012 | -1.463 |
| cholesterol | -0.637 | -0.521 |
| AJ | 0.034 | 0.286 |
| Bibs02 | 0.544 | 0.362 |
| Bibs02c | -0.226 | -1.028 |
| BL6 | 0.228 | -1.144 |
| BL6a | -0.795 | -0.839 |
| BXD01 | -0.459 | -0.552 |
| BXD010 | -1.03 | -1.172 |
| BXD011 | -0.309 | 0.923 |
| BXD03 | -0.198 | -0.867 |
| BXD04 | 0.465 | -1.131 |
| BXD05 | 0.336 | 0.216 |
| BXD06 | -0.408 | -0.566 |
| BXD07 | -0.953 | -1.267 |
| BXD08 | -0.915 | -0.653 |
| BXD09 | -0.341 | -0.596 |
| CAST | 0.26 | -0.102 |
| CCcont | -0.657 | -0.733 |
| DS01 | -0.082 | 0.197 |
| DS02 | 0.213 | 0.983 |
| DS04 | -0.114 | 1.086 |
| DS0c | 0.82 | 0.855 |
| GP01 | 0.425 | -0.903 |
| GP02 | -0.286 | -0.761 |
| GP0c | 0.624 | -0.057 |
| NOD | -0.078 | -0.952 |
| NZO | -0.624 | 0.465 |
| PWK | -0.386 | -0.831 |
| H37Rv_KO_CtpC | -0.7 | 0.488 |
| H37Rv_KO_CtpD | 0.294 | 0.642 |
| H37Rv_KO_Rv1272 | 0.205 | 1.513 |
| H37Rv_KO_SugABC | 0.789 | 0.122 |
| H37Rv_KO_MbtN | 0.837 | 1.471 |
| Trans05 | -0.497 | 1.251 |
| macrophage_unactivated | 0.568 | 0.0 |
| IL1 | -0.629 | 0.317 |
| Rapamycin | -0.055 | -0.74 |
| Tcell | -0.14 | 0.349 |
| GMCSF | -0.28 | -0.304 |
| IFNab | 0.0 | 1.654 |
| IFNg | 0.7 | 0.802 |
| IFNg_GMCSF1 | 0.566 | 1.216 |
| Rv1432_day32 | 0.555 | 0.541 |
| Rv1565c_day32 | 0.133 | 0.0 |
| secA2_input | -0.009 | -0.495 |
| delta_Rv3594 | -0.239 | 1.53 |
| delta_Rv3717 | -0.321 | 0.881 |
| delta_Rv3811 | 0.589 | 1.041 |
| delta_Rv0954 | 0.668 | -0.079 |
| PonA1 | -0.319 | 0.315 |
| EccD1_KO | -0.447 | -0.595 |
| EspI_KO | 0.0 | -0.516 |
| PE35_KO | -1.555 | -0.528 |
| PPE68_KO | -1.526 | -0.896 |
| glycerol2 | 0.13 | 0.369 |
| lignocerate | -0.252 | 0.826 |
| oleate | -0.088 | 0.0 |
| phosphatidylcholine | -0.258 | 0.531 |
| acetate | 0.083 | 1.127 |
| glucAc | -0.341 | 1.034 |
| Rv0950ko | -0.175 | 0.0 |
| Rv1096ko | -0.19 | 0.0 |
| Rv3684ko | 0.183 | 0.0 |
| delta_otsA_trehalose | -0.649 | 0.0 |