Top 10 genes with highest correlation to Rv1072/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0563/htpX | (cc=0.7046) | info on Rv0563/htpX |
| Rv1100/- | (cc=0.6954) | info on Rv1100/- |
| Rv3419c/gcp | (cc=0.6835) | info on Rv3419c/gcp |
| Rv3689/- | (cc=0.6562) | info on Rv3689/- |
| Rv1239c/corA | (cc=0.6489) | info on Rv1239c/corA |
| Rv0051/- | (cc=0.6321) | info on Rv0051/- |
| Rv3278c/- | (cc=0.6209) | info on Rv3278c/- |
| Rv0823c/- | (cc=0.6041) | info on Rv0823c/- |
| Rv2793c/truB | (cc=0.5971) | info on Rv2793c/truB |
| Rv1209/- | (cc=0.596) | info on Rv1209/- |
Correlation of Rv1072/- with Rv0563/htpX
Normalized LFCs for Rv1072/-:
(description and provenance of datasets)
| Rv1072/- | Rv0563/htpX | |
| Fe_supp_jason_reseq | 3.452 | 1.76 |
| low_pH_jason_reseq | 0.709 | 3.803 |
| NO_jason_reseq | -0.205 | 0.845 |
| B6_jason_reseq | 1.58 | 1.318 |
| MHCII_jason_reseq | 0.0 | -1.332 |
| Isoniazid02 | -2.007 | -2.187 |
| Rifampicin4 | -0.653 | -2.342 |
| Ethambutol3 | 3.263 | 1.796 |
| Meropenem3 | 0.586 | 0.034 |
| Vancomycin16 | -0.727 | -2.435 |
| Rv2680_day32 | -0.803 | 0.241 |
| H37Rv_KO_MarP | -2.718 | -3.429 |
| hypoxia_3wks | 0.0 | 1.236 |
| hypoxia_6wks | 1.451 | -0.672 |
| glycerol | 0.089 | -0.579 |
| cholesterol | -1.261 | -0.773 |
| AJ | 0.948 | 1.479 |
| Bibs02 | 0.747 | 0.216 |
| Bibs02c | 0.653 | 0.399 |
| BL6 | 2.081 | 1.054 |
| BL6a | 1.728 | 1.263 |
| BXD01 | 3.146 | 1.681 |
| BXD010 | 2.277 | 1.54 |
| BXD011 | 3.036 | 0.722 |
| BXD03 | 2.899 | 2.623 |
| BXD04 | 5.696 | 2.885 |
| BXD05 | 2.5 | 1.003 |
| BXD06 | 2.909 | 1.906 |
| BXD07 | 2.518 | 2.27 |
| BXD08 | 3.668 | 2.084 |
| BXD09 | 1.736 | 1.131 |
| CAST | 4.513 | 1.94 |
| CCcont | 2.429 | 1.835 |
| DS01 | 0.965 | 0.76 |
| DS02 | 0.821 | -1.161 |
| DS04 | 0.793 | -0.259 |
| DS0c | 0.748 | 0.413 |
| GP01 | 0.0 | 0.318 |
| GP02 | -0.166 | -0.638 |
| GP0c | -0.26 | 0.335 |
| NOD | 1.87 | 3.414 |
| NZO | 0.815 | 1.527 |
| PWK | 2.865 | 3.844 |
| H37Rv_KO_CtpC | 3.557 | 3.597 |
| H37Rv_KO_CtpD | 1.054 | -0.363 |
| H37Rv_KO_Rv1272 | 1.837 | -0.329 |
| H37Rv_KO_SugABC | 1.948 | 0.797 |
| H37Rv_KO_MbtN | 2.179 | 0.196 |
| Trans05 | 2.15 | 2.303 |
| macrophage_unactivated | -1.13 | 0.48 |
| IL1 | -1.949 | -0.397 |
| Rapamycin | -2.961 | -1.114 |
| Tcell | 1.466 | 1.193 |
| GMCSF | -1.191 | 0.834 |
| IFNab | 0.0 | 1.466 |
| IFNg | -1.756 | -0.754 |
| IFNg_GMCSF1 | -0.465 | 0.386 |
| Rv1432_day32 | -0.887 | 0.763 |
| Rv1565c_day32 | 0.401 | -0.924 |
| secA2_input | 1.079 | 1.371 |
| delta_Rv3594 | -0.846 | -1.634 |
| delta_Rv3717 | -2.079 | -3.374 |
| delta_Rv3811 | -0.717 | -1.28 |
| delta_Rv0954 | -2.135 | -3.76 |
| PonA1 | -1.272 | -1.401 |
| EccD1_KO | 1.312 | 2.125 |
| EspI_KO | 1.041 | 1.882 |
| PE35_KO | 0.306 | -0.187 |
| PPE68_KO | 0.653 | 1.123 |
| glycerol2 | -0.451 | 0.369 |
| lignocerate | -0.897 | 0.168 |
| oleate | -0.588 | 0.196 |
| phosphatidylcholine | -1.207 | 0.368 |
| acetate | -0.535 | 1.539 |
| glucAc | 0.554 | 0.0 |
| Rv0950ko | 0.28 | 0.0 |
| Rv1096ko | 2.524 | 3.29 |
| Rv3684ko | 2.6 | 2.613 |
| delta_otsA_trehalose | -1.013 | 2.344 |