Top 10 genes with highest correlation to Rv0919/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0724A/- | (cc=0.5068) | info on Rv0724A/- |
| Rv0840c/pip | (cc=0.4954) | info on Rv0840c/pip |
| Rv2083/- | (cc=0.4901) | info on Rv2083/- |
| Rv1989c/- | (cc=0.4782) | info on Rv1989c/- |
| Rv1563c/treY | (cc=0.4717) | info on Rv1563c/treY |
| Rv3060c/- | (cc=0.4571) | info on Rv3060c/- |
| Rv1863c/- | (cc=0.4522) | info on Rv1863c/- |
| Rv3903c/- | (cc=0.4476) | info on Rv3903c/- |
| Rv2293c/- | (cc=0.4443) | info on Rv2293c/- |
| Rv2624c/- | (cc=0.4326) | info on Rv2624c/- |
Correlation of Rv0919/- with Rv0724A/-
Normalized LFCs for Rv0919/-:
(description and provenance of datasets)
| Rv0919/- | Rv0724A/- | |
| Fe_supp_jason_reseq | 0.575 | -1.474 |
| low_pH_jason_reseq | 0.351 | -2.195 |
| NO_jason_reseq | -0.546 | -1.549 |
| B6_jason_reseq | 0.104 | -1.015 |
| MHCII_jason_reseq | 1.078 | 0.724 |
| Isoniazid02 | 0.506 | -0.495 |
| Rifampicin4 | -0.184 | -1.362 |
| Ethambutol3 | 1.583 | -0.81 |
| Meropenem3 | 0.078 | -1.499 |
| Vancomycin16 | 0.337 | -0.703 |
| Rv2680_day32 | -0.401 | 0.614 |
| H37Rv_KO_MarP | 0.111 | -0.406 |
| hypoxia_3wks | 0.355 | -0.981 |
| hypoxia_6wks | -0.271 | -1.403 |
| glycerol | -0.392 | 0.519 |
| cholesterol | -0.174 | -1.029 |
| AJ | 0.503 | 0.898 |
| Bibs02 | 0.609 | 0.244 |
| Bibs02c | 0.755 | 0.111 |
| BL6 | -1.06 | -3.575 |
| BL6a | 0.271 | -1.112 |
| BXD01 | -0.288 | -0.825 |
| BXD010 | 0.587 | -2.545 |
| BXD011 | -0.122 | -1.552 |
| BXD03 | 0.287 | -0.961 |
| BXD04 | 0.402 | -0.638 |
| BXD05 | -0.548 | -1.374 |
| BXD06 | -0.132 | -1.514 |
| BXD07 | -0.043 | -1.022 |
| BXD08 | -0.824 | -1.221 |
| BXD09 | 0.011 | -1.807 |
| CAST | -0.394 | 0.531 |
| CCcont | -0.963 | -4.268 |
| DS01 | 0.436 | 0.094 |
| DS02 | -0.495 | -0.936 |
| DS04 | 1.124 | -0.835 |
| DS0c | -0.013 | -0.473 |
| GP01 | -0.079 | -2.822 |
| GP02 | 0.306 | -1.581 |
| GP0c | -0.314 | -2.584 |
| NOD | 0.542 | 0.015 |
| NZO | 0.4 | 0.597 |
| PWK | -0.229 | -0.24 |
| H37Rv_KO_CtpC | -0.353 | -0.079 |
| H37Rv_KO_CtpD | 0.781 | 1.128 |
| H37Rv_KO_Rv1272 | 0.343 | 0.333 |
| H37Rv_KO_SugABC | 0.318 | -1.764 |
| H37Rv_KO_MbtN | 0.491 | -2.048 |
| Trans05 | 0.354 | -0.111 |
| macrophage_unactivated | 0.054 | -1.335 |
| IL1 | 0.113 | -0.074 |
| Rapamycin | -0.132 | -1.611 |
| Tcell | -0.349 | -1.486 |
| GMCSF | 0.784 | -0.481 |
| IFNab | -0.478 | -2.035 |
| IFNg | -0.011 | -1.697 |
| IFNg_GMCSF1 | 0.185 | 0.368 |
| Rv1432_day32 | 0.894 | 1.902 |
| Rv1565c_day32 | -0.239 | -1.579 |
| secA2_input | -0.454 | -0.268 |
| delta_Rv3594 | 0.098 | 0.434 |
| delta_Rv3717 | 0.608 | 0.71 |
| delta_Rv3811 | -0.665 | -0.344 |
| delta_Rv0954 | 0.385 | -0.395 |
| PonA1 | -0.218 | -0.233 |
| EccD1_KO | 0.368 | 0.046 |
| EspI_KO | 1.403 | -0.385 |
| PE35_KO | 0.563 | 0.473 |
| PPE68_KO | 0.301 | -0.282 |
| glycerol2 | -0.057 | -0.249 |
| lignocerate | -0.179 | -1.405 |
| oleate | 0.682 | 0.086 |
| phosphatidylcholine | 0.197 | -0.183 |
| acetate | -0.628 | -1.19 |
| glucAc | -0.871 | -2.881 |
| Rv0950ko | -0.311 | 0.793 |
| Rv1096ko | 0.027 | -0.283 |
| Rv3684ko | -0.203 | -0.93 |
| delta_otsA_trehalose | 3.331 | 2.105 |