Top 10 genes with highest correlation to Rv0870c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2237A/- | (cc=0.6004) | info on Rv2237A/- |
| Rv1038c/esxJ | (cc=0.5996) | info on Rv1038c/esxJ |
| Rv2638/- | (cc=0.5962) | info on Rv2638/- |
| Rv3605c/- | (cc=0.5959) | info on Rv3605c/- |
| Rv2577/- | (cc=0.5885) | info on Rv2577/- |
| Rv3506/fadD17 | (cc=0.5738) | info on Rv3506/fadD17 |
| Rv1057/- | (cc=0.5734) | info on Rv1057/- |
| Rv2240c/- | (cc=0.5598) | info on Rv2240c/- |
| Rv3081/- | (cc=0.5467) | info on Rv3081/- |
| Rv2426c/- | (cc=0.5439) | info on Rv2426c/- |
Correlation of Rv0870c/- with Rv2237A/-
Normalized LFCs for Rv0870c/-:
(description and provenance of datasets)
| Rv0870c/- | Rv2237A/- | |
| Fe_supp_jason_reseq | -0.062 | 1.1 |
| low_pH_jason_reseq | -0.308 | -0.631 |
| NO_jason_reseq | 1.013 | -0.32 |
| B6_jason_reseq | -0.715 | -0.363 |
| MHCII_jason_reseq | 0.731 | -0.119 |
| Isoniazid02 | -0.664 | 0.362 |
| Rifampicin4 | -0.485 | 0.42 |
| Ethambutol3 | -0.136 | 0.275 |
| Meropenem3 | 0.908 | 1.324 |
| Vancomycin16 | 0.088 | -0.146 |
| Rv2680_day32 | -0.139 | -0.978 |
| H37Rv_KO_MarP | 0.68 | -0.181 |
| hypoxia_3wks | -0.642 | -0.606 |
| hypoxia_6wks | -0.576 | -2.552 |
| glycerol | -0.799 | -0.162 |
| cholesterol | -0.376 | -0.957 |
| AJ | -0.373 | -0.171 |
| Bibs02 | 0.491 | -0.011 |
| Bibs02c | 0.109 | -0.634 |
| BL6 | -0.324 | -1.255 |
| BL6a | -0.696 | -1.158 |
| BXD01 | -0.852 | -2.152 |
| BXD010 | -0.156 | -1.848 |
| BXD011 | -0.188 | -1.339 |
| BXD03 | -1.092 | -1.858 |
| BXD04 | -0.503 | -1.646 |
| BXD05 | -0.666 | -2.148 |
| BXD06 | -0.854 | -1.59 |
| BXD07 | -0.255 | -2.937 |
| BXD08 | -0.708 | -1.02 |
| BXD09 | -0.85 | -1.931 |
| CAST | -0.654 | -1.253 |
| CCcont | 0.553 | -1.09 |
| DS01 | 0.036 | 0.599 |
| DS02 | 0.025 | 0.348 |
| DS04 | 0.044 | 0.046 |
| DS0c | 0.409 | 0.55 |
| GP01 | 0.381 | -2.855 |
| GP02 | 0.828 | -2.261 |
| GP0c | -0.726 | -2.818 |
| NOD | -0.187 | -0.965 |
| NZO | 0.023 | 1.238 |
| PWK | -0.509 | -1.147 |
| H37Rv_KO_CtpC | -0.845 | 0.029 |
| H37Rv_KO_CtpD | 0.934 | 1.152 |
| H37Rv_KO_Rv1272 | -2.361 | -0.671 |
| H37Rv_KO_SugABC | -1.757 | -2.615 |
| H37Rv_KO_MbtN | -1.421 | -1.135 |
| Trans05 | -0.187 | -3.449 |
| macrophage_unactivated | -1.884 | -1.657 |
| IL1 | 0.252 | 0.347 |
| Rapamycin | -0.181 | 1.565 |
| Tcell | -0.606 | -0.081 |
| GMCSF | -0.269 | 0.758 |
| IFNab | -0.308 | -0.635 |
| IFNg | -0.208 | -0.877 |
| IFNg_GMCSF1 | -0.503 | -0.157 |
| Rv1432_day32 | 1.802 | 1.645 |
| Rv1565c_day32 | 0.697 | -0.218 |
| secA2_input | -0.183 | -0.194 |
| delta_Rv3594 | -0.375 | 0.376 |
| delta_Rv3717 | -0.852 | -1.828 |
| delta_Rv3811 | -1.689 | -0.528 |
| delta_Rv0954 | -0.673 | 0.318 |
| PonA1 | 0.143 | -1.895 |
| EccD1_KO | 1.095 | 0.148 |
| EspI_KO | 0.744 | 0.864 |
| PE35_KO | -0.405 | 0.957 |
| PPE68_KO | -0.893 | 1.241 |
| glycerol2 | 1.562 | 3.085 |
| lignocerate | 2.115 | 4.586 |
| oleate | -0.425 | 0.196 |
| phosphatidylcholine | 1.562 | 3.931 |
| acetate | 1.637 | 5.94 |
| glucAc | 1.823 | 4.505 |
| Rv0950ko | 0.781 | 0.1 |
| Rv1096ko | 0.241 | -0.504 |
| Rv3684ko | 0.848 | -1.88 |
| delta_otsA_trehalose | 0.897 | 4.101 |