Top 10 genes with highest correlation to Rv0790c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0828c/- | (cc=0.4919) | info on Rv0828c/- |
| Rv1200/- | (cc=0.4862) | info on Rv1200/- |
| Rv3840/- | (cc=0.4834) | info on Rv3840/- |
| Rv0231/fadE4 | (cc=0.4772) | info on Rv0231/fadE4 |
| Rv1501/- | (cc=0.4734) | info on Rv1501/- |
| Rv2022c/- | (cc=0.4681) | info on Rv2022c/- |
| Rv0874c/- | (cc=0.46) | info on Rv0874c/- |
| Rv0872c/PE_PGRS15 | (cc=0.4437) | info on Rv0872c/PE_PGRS15 |
| Rv3487c/lipF | (cc=0.4385) | info on Rv3487c/lipF |
| Rv0230c/php | (cc=0.4364) | info on Rv0230c/php |
Correlation of Rv0790c/- with Rv0828c/-
Normalized LFCs for Rv0790c/-:
(description and provenance of datasets)
| Rv0790c/- | Rv0828c/- | |
| Fe_supp_jason_reseq | -0.283 | -0.395 |
| low_pH_jason_reseq | -0.95 | -0.385 |
| NO_jason_reseq | -0.47 | 0.47 |
| B6_jason_reseq | 0.325 | 0.404 |
| MHCII_jason_reseq | 0.151 | 0.311 |
| Isoniazid02 | -0.783 | -0.883 |
| Rifampicin4 | -0.823 | -0.276 |
| Ethambutol3 | -0.527 | 0.516 |
| Meropenem3 | -0.11 | -0.4 |
| Vancomycin16 | -0.783 | -0.515 |
| Rv2680_day32 | -0.244 | -1.133 |
| H37Rv_KO_MarP | 0.083 | 0.196 |
| hypoxia_3wks | -0.024 | 0.486 |
| hypoxia_6wks | 0.257 | 0.345 |
| glycerol | -0.323 | -0.345 |
| cholesterol | -0.166 | -0.055 |
| AJ | -0.403 | 0.032 |
| Bibs02 | -0.023 | -0.101 |
| Bibs02c | 0.041 | 0.182 |
| BL6 | -0.015 | -0.009 |
| BL6a | 0.138 | 0.334 |
| BXD01 | -0.245 | -0.084 |
| BXD010 | -0.216 | 0.086 |
| BXD011 | 0.069 | 0.663 |
| BXD03 | 0.318 | 0.223 |
| BXD04 | -0.072 | -0.146 |
| BXD05 | 0.278 | 0.418 |
| BXD06 | 0.088 | -0.025 |
| BXD07 | -0.261 | -0.072 |
| BXD08 | 0.322 | -0.038 |
| BXD09 | 0.129 | 0.172 |
| CAST | 0.452 | 0.155 |
| CCcont | -0.325 | -0.567 |
| DS01 | 0.243 | 0.626 |
| DS02 | 0.301 | 0.857 |
| DS04 | 0.773 | 0.791 |
| DS0c | -0.027 | 0.548 |
| GP01 | -0.004 | -0.566 |
| GP02 | -0.683 | -1.186 |
| GP0c | -0.08 | -0.767 |
| NOD | 0.755 | 0.379 |
| NZO | -0.301 | 0.126 |
| PWK | 0.136 | 0.408 |
| H37Rv_KO_CtpC | -0.229 | 0.138 |
| H37Rv_KO_CtpD | 0.318 | 0.063 |
| H37Rv_KO_Rv1272 | 0.31 | 0.199 |
| H37Rv_KO_SugABC | 1.058 | 0.56 |
| H37Rv_KO_MbtN | 0.457 | 0.052 |
| Trans05 | -0.336 | 0.065 |
| macrophage_unactivated | -0.294 | 0.019 |
| IL1 | 0.317 | -0.219 |
| Rapamycin | 0.267 | -0.196 |
| Tcell | -0.16 | -0.104 |
| GMCSF | -0.383 | -0.042 |
| IFNab | -0.163 | -0.184 |
| IFNg | -0.086 | -0.182 |
| IFNg_GMCSF1 | 0.958 | 0.05 |
| Rv1432_day32 | 0.445 | -0.086 |
| Rv1565c_day32 | -0.272 | -0.011 |
| secA2_input | 0.147 | 0.055 |
| delta_Rv3594 | -0.262 | 0.289 |
| delta_Rv3717 | -0.376 | 0.053 |
| delta_Rv3811 | -0.553 | -0.638 |
| delta_Rv0954 | -0.433 | 0.163 |
| PonA1 | -0.554 | 0.095 |
| EccD1_KO | 0.02 | -0.671 |
| EspI_KO | 0.568 | -0.023 |
| PE35_KO | -0.155 | -0.802 |
| PPE68_KO | -0.125 | -0.637 |
| glycerol2 | 0.262 | 0.362 |
| lignocerate | 0.303 | 0.201 |
| oleate | 0.452 | 0.407 |
| phosphatidylcholine | 0.406 | 0.585 |
| acetate | -0.173 | -0.489 |
| glucAc | -0.293 | -0.207 |
| Rv0950ko | -0.075 | 0.286 |
| Rv1096ko | 0.057 | 0.175 |
| Rv3684ko | -0.753 | 0.219 |
| delta_otsA_trehalose | -1.767 | -0.595 |