Top 10 genes with highest correlation to Rv0781/ptrBa:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0526/- | (cc=0.6464) | info on Rv0526/- |
| Rv2290/lppO | (cc=0.609) | info on Rv2290/lppO |
| Rv1239c/corA | (cc=0.5778) | info on Rv1239c/corA |
| Rv3419c/gcp | (cc=0.5591) | info on Rv3419c/gcp |
| Rv1298/rpmE | (cc=0.5141) | info on Rv1298/rpmE |
| Rv0622/- | (cc=0.5055) | info on Rv0622/- |
| Rv2909c/rpsP | (cc=0.5043) | info on Rv2909c/rpsP |
| Rv3690/- | (cc=0.4873) | info on Rv3690/- |
| Rv3455c/truA | (cc=0.4872) | info on Rv3455c/truA |
| Rv0150c/- | (cc=0.4861) | info on Rv0150c/- |
Correlation of Rv0781/ptrBa with Rv0526/-
Normalized LFCs for Rv0781/ptrBa:
(description and provenance of datasets)
| Rv0781/ptrBa | Rv0526/- | |
| Fe_supp_jason_reseq | -0.268 | 0.0 |
| low_pH_jason_reseq | 0.0 | 0.0 |
| NO_jason_reseq | -0.291 | 0.0 |
| B6_jason_reseq | 0.921 | 0.0 |
| MHCII_jason_reseq | 0.84 | 0.0 |
| Isoniazid02 | 0.0 | 0.0 |
| Rifampicin4 | 0.236 | 0.0 |
| Ethambutol3 | -0.113 | 0.0 |
| Meropenem3 | -0.231 | 0.0 |
| Vancomycin16 | 0.451 | 0.0 |
| Rv2680_day32 | 0.855 | 0.0 |
| H37Rv_KO_MarP | 0.865 | 0.0 |
| hypoxia_3wks | 0.558 | 0.0 |
| hypoxia_6wks | -0.257 | 0.0 |
| glycerol | -0.584 | 0.0 |
| cholesterol | 0.24 | 0.0 |
| AJ | 0.524 | 0.0 |
| Bibs02 | 0.413 | 0.0 |
| Bibs02c | -0.706 | 0.0 |
| BL6 | 1.035 | 0.0 |
| BL6a | 1.128 | 0.0 |
| BXD01 | 1.199 | 0.0 |
| BXD010 | 0.588 | 0.0 |
| BXD011 | 1.902 | 0.0 |
| BXD03 | 0.852 | 0.0 |
| BXD04 | 1.888 | 0.0 |
| BXD05 | 0.794 | 0.0 |
| BXD06 | 1.014 | 0.0 |
| BXD07 | 1.355 | 0.0 |
| BXD08 | 1.321 | 0.0 |
| BXD09 | 1.663 | 0.0 |
| CAST | 0.651 | 0.0 |
| CCcont | 1.082 | 0.0 |
| DS01 | -0.27 | 0.0 |
| DS02 | -0.629 | 0.0 |
| DS04 | -0.967 | 0.0 |
| DS0c | 0.786 | 0.0 |
| GP01 | -1.099 | 0.0 |
| GP02 | -0.843 | 0.0 |
| GP0c | -1.091 | 0.0 |
| NOD | 0.441 | 0.0 |
| NZO | 1.296 | 0.0 |
| PWK | 1.623 | 0.0 |
| H37Rv_KO_CtpC | -0.06 | 0.0 |
| H37Rv_KO_CtpD | 1.006 | 0.0 |
| H37Rv_KO_Rv1272 | -0.219 | 0.0 |
| H37Rv_KO_SugABC | 0.681 | 0.0 |
| H37Rv_KO_MbtN | -0.865 | 0.0 |
| Trans05 | -0.812 | 0.0 |
| macrophage_unactivated | 1.521 | 0.0 |
| IL1 | -0.163 | 0.0 |
| Rapamycin | -0.439 | 0.0 |
| Tcell | -0.274 | 0.0 |
| GMCSF | 0.14 | 0.0 |
| IFNab | -0.432 | 0.0 |
| IFNg | -0.072 | 0.0 |
| IFNg_GMCSF1 | 0.0 | 0.0 |
| Rv1432_day32 | 0.445 | 0.0 |
| Rv1565c_day32 | -0.199 | 0.0 |
| secA2_input | -1.263 | -0.412 |
| delta_Rv3594 | 0.702 | 0.0 |
| delta_Rv3717 | 0.81 | 0.0 |
| delta_Rv3811 | 1.276 | 0.205 |
| delta_Rv0954 | 0.506 | 0.0 |
| PonA1 | 0.0 | 0.0 |
| EccD1_KO | -0.171 | 0.0 |
| EspI_KO | 0.676 | 0.0 |
| PE35_KO | 0.0 | 0.767 |
| PPE68_KO | 0.0 | 0.442 |
| glycerol2 | -2.413 | -1.499 |
| lignocerate | -2.233 | -1.303 |
| oleate | -2.633 | -1.517 |
| phosphatidylcholine | -2.323 | -1.499 |
| acetate | -2.592 | -1.779 |
| glucAc | -0.911 | -1.106 |
| Rv0950ko | 0.458 | 0.416 |
| Rv1096ko | 0.347 | 0.0 |
| Rv3684ko | 0.498 | 0.0 |
| delta_otsA_trehalose | -1.892 | 0.0 |