Top 10 genes with highest correlation to Rv0749/vapC31:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0319/pcp | (cc=0.5839) | info on Rv0319/pcp |
| Rv2606c/snzP | (cc=0.5455) | info on Rv2606c/snzP |
| Rv3482c/- | (cc=0.4948) | info on Rv3482c/- |
| Rv3559c/- | (cc=0.4937) | info on Rv3559c/- |
| Rv1193/fadD36 | (cc=0.4916) | info on Rv1193/fadD36 |
| Rv2237A/- | (cc=0.4762) | info on Rv2237A/- |
| Rv2836c/dinF | (cc=0.4749) | info on Rv2836c/dinF |
| Rv0044c/- | (cc=0.4633) | info on Rv0044c/- |
| Rv0383c/- | (cc=0.4541) | info on Rv0383c/- |
| Rv2473/- | (cc=0.4472) | info on Rv2473/- |
Correlation of Rv0749/vapC31 with Rv0319/pcp
Normalized LFCs for Rv0749/vapC31:
(description and provenance of datasets)
| Rv0749/vapC31 | Rv0319/pcp | |
| Fe_supp_jason_reseq | -0.068 | 0.29 |
| low_pH_jason_reseq | -0.614 | 1.109 |
| NO_jason_reseq | -0.74 | 0.058 |
| B6_jason_reseq | -0.508 | 0.452 |
| MHCII_jason_reseq | 1.294 | 0.777 |
| Isoniazid02 | 0.131 | 0.895 |
| Rifampicin4 | 0.531 | 0.636 |
| Ethambutol3 | 0.322 | 0.209 |
| Meropenem3 | 2.302 | 0.0 |
| Vancomycin16 | 0.52 | 0.499 |
| Rv2680_day32 | -2.208 | -0.121 |
| H37Rv_KO_MarP | -0.825 | 0.034 |
| hypoxia_3wks | 0.032 | 0.363 |
| hypoxia_6wks | -0.388 | 0.106 |
| glycerol | -0.434 | 0.0 |
| cholesterol | -1.482 | 0.12 |
| AJ | -0.852 | 0.289 |
| Bibs02 | -0.634 | -0.748 |
| Bibs02c | -0.308 | 0.344 |
| BL6 | 0.212 | 0.367 |
| BL6a | -0.471 | 0.077 |
| BXD01 | -0.768 | -0.092 |
| BXD010 | -0.188 | 0.211 |
| BXD011 | -1.089 | 0.065 |
| BXD03 | -0.075 | 0.14 |
| BXD04 | 1.251 | -0.367 |
| BXD05 | -0.116 | 0.924 |
| BXD06 | 0.469 | -0.251 |
| BXD07 | -0.545 | -0.233 |
| BXD08 | -0.014 | -0.278 |
| BXD09 | -0.644 | -0.284 |
| CAST | 0.184 | -0.265 |
| CCcont | 0.119 | 0.495 |
| DS01 | -0.009 | 0.491 |
| DS02 | -0.517 | 0.145 |
| DS04 | -0.367 | -0.714 |
| DS0c | -0.668 | 0.501 |
| GP01 | -0.633 | 0.022 |
| GP02 | -1.356 | -1.296 |
| GP0c | -1.029 | -0.648 |
| NOD | -1.227 | 0.488 |
| NZO | -1.163 | -0.767 |
| PWK | -0.109 | 0.131 |
| H37Rv_KO_CtpC | -0.877 | -0.824 |
| H37Rv_KO_CtpD | -0.936 | -2.477 |
| H37Rv_KO_Rv1272 | -1.456 | -1.818 |
| H37Rv_KO_SugABC | -1.234 | -0.776 |
| H37Rv_KO_MbtN | -0.682 | -0.808 |
| Trans05 | -1.884 | -0.917 |
| macrophage_unactivated | 0.164 | 0.161 |
| IL1 | -0.225 | 0.027 |
| Rapamycin | 1.065 | 0.157 |
| Tcell | 1.075 | 0.583 |
| GMCSF | 0.111 | -0.285 |
| IFNab | 0.998 | -0.738 |
| IFNg | -0.612 | -0.214 |
| IFNg_GMCSF1 | 1.747 | 0.16 |
| Rv1432_day32 | 0.064 | 0.541 |
| Rv1565c_day32 | 0.903 | 0.971 |
| secA2_input | -0.398 | 0.574 |
| delta_Rv3594 | 0.635 | 1.23 |
| delta_Rv3717 | 0.273 | 1.056 |
| delta_Rv3811 | 0.22 | 1.108 |
| delta_Rv0954 | 1.079 | 1.795 |
| PonA1 | 2.08 | 2.507 |
| EccD1_KO | -0.618 | 0.069 |
| EspI_KO | 0.02 | 0.63 |
| PE35_KO | -1.155 | -0.315 |
| PPE68_KO | -0.822 | 0.79 |
| glycerol2 | 1.048 | 1.77 |
| lignocerate | 1.516 | 2.289 |
| oleate | 0.505 | 0.457 |
| phosphatidylcholine | 1.253 | 1.923 |
| acetate | 1.987 | 1.662 |
| glucAc | 1.825 | 1.437 |
| Rv0950ko | 0.22 | -0.76 |
| Rv1096ko | 0.066 | -0.395 |
| Rv3684ko | -0.717 | -2.011 |
| delta_otsA_trehalose | 0.159 | 1.757 |