Top 10 genes with highest correlation to Rv0694/lldD1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0696/- | (cc=0.581) | info on Rv0696/- |
| Rv2831/echA16 | (cc=0.51) | info on Rv2831/echA16 |
| Rv2013/- | (cc=0.4717) | info on Rv2013/- |
| Rv0692/- | (cc=0.4577) | info on Rv0692/- |
| Rv3495c/lprN | (cc=0.4442) | info on Rv3495c/lprN |
| Rv1628c/- | (cc=0.4411) | info on Rv1628c/- |
| Rv3439c/- | (cc=0.438) | info on Rv3439c/- |
| Rv1395/- | (cc=0.4326) | info on Rv1395/- |
| Rv2609c/- | (cc=0.4187) | info on Rv2609c/- |
| Rv1341/- | (cc=0.4167) | info on Rv1341/- |
Correlation of Rv0694/lldD1 with Rv0696/-
Normalized LFCs for Rv0694/lldD1:
(description and provenance of datasets)
| Rv0694/lldD1 | Rv0696/- | |
| Fe_supp_jason_reseq | -1.096 | 0.23 |
| low_pH_jason_reseq | -0.279 | -1.084 |
| NO_jason_reseq | 0.515 | 0.158 |
| B6_jason_reseq | 0.34 | 0.252 |
| MHCII_jason_reseq | -0.163 | -0.158 |
| Isoniazid02 | 0.111 | 0.911 |
| Rifampicin4 | 0.934 | 0.617 |
| Ethambutol3 | 1.374 | 1.003 |
| Meropenem3 | 0.653 | 0.932 |
| Vancomycin16 | 1.228 | 0.875 |
| Rv2680_day32 | -1.631 | 0.0 |
| H37Rv_KO_MarP | 0.639 | 0.285 |
| hypoxia_3wks | 0.953 | 1.12 |
| hypoxia_6wks | 0.0 | 1.284 |
| glycerol | 0.686 | 1.815 |
| cholesterol | -2.436 | -2.58 |
| AJ | -0.946 | -1.649 |
| Bibs02 | -1.542 | -0.575 |
| Bibs02c | -0.103 | -0.546 |
| BL6 | -1.148 | -0.856 |
| BL6a | -0.544 | -0.383 |
| BXD01 | -0.531 | -1.153 |
| BXD010 | -0.175 | -0.877 |
| BXD011 | -1.121 | -0.289 |
| BXD03 | -1.001 | -0.307 |
| BXD04 | -0.419 | 0.461 |
| BXD05 | -1.589 | -0.665 |
| BXD06 | -0.544 | -0.371 |
| BXD07 | -1.071 | -0.654 |
| BXD08 | -0.421 | -0.519 |
| BXD09 | -0.541 | -0.521 |
| CAST | -0.632 | -1.403 |
| CCcont | -0.837 | -0.264 |
| DS01 | -0.748 | -0.536 |
| DS02 | 0.2 | -0.684 |
| DS04 | -0.031 | -3.062 |
| DS0c | -0.641 | -0.804 |
| GP01 | 1.079 | -1.081 |
| GP02 | -1.025 | -1.422 |
| GP0c | 0.139 | -0.409 |
| NOD | -1.738 | -1.061 |
| NZO | -0.506 | -1.029 |
| PWK | 0.063 | -1.502 |
| H37Rv_KO_CtpC | -0.911 | -1.07 |
| H37Rv_KO_CtpD | -2.236 | -1.785 |
| H37Rv_KO_Rv1272 | -1.409 | -1.846 |
| H37Rv_KO_SugABC | -0.136 | 0.55 |
| H37Rv_KO_MbtN | -1.325 | 1.64 |
| Trans05 | -1.15 | -0.59 |
| macrophage_unactivated | 0.0 | -1.016 |
| IL1 | 4.111 | 1.987 |
| Rapamycin | 1.129 | 1.832 |
| Tcell | 0.958 | -0.899 |
| GMCSF | 0.238 | -0.768 |
| IFNab | -0.444 | -0.314 |
| IFNg | -0.126 | -1.547 |
| IFNg_GMCSF1 | -0.462 | -0.5 |
| Rv1432_day32 | -1.158 | -0.858 |
| Rv1565c_day32 | 0.599 | -0.224 |
| secA2_input | 1.492 | 0.221 |
| delta_Rv3594 | 1.025 | 1.144 |
| delta_Rv3717 | 1.562 | 1.027 |
| delta_Rv3811 | 1.582 | 1.309 |
| delta_Rv0954 | 1.567 | 0.401 |
| PonA1 | 0.34 | 0.697 |
| EccD1_KO | -1.237 | -1.204 |
| EspI_KO | -0.265 | -0.371 |
| PE35_KO | -0.767 | -1.164 |
| PPE68_KO | -1.078 | -1.491 |
| glycerol2 | 1.033 | 1.401 |
| lignocerate | -1.679 | -1.218 |
| oleate | 0.776 | 1.645 |
| phosphatidylcholine | 0.15 | 0.475 |
| acetate | -0.883 | 0.564 |
| glucAc | -0.923 | -0.044 |
| Rv0950ko | -1.462 | -0.501 |
| Rv1096ko | -0.582 | 0.615 |
| Rv3684ko | -1.474 | 0.393 |
| delta_otsA_trehalose | -0.811 | 0.675 |