Top 10 genes with highest correlation to Rv0443/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3435c/- | (cc=0.5662) | info on Rv3435c/- |
| Rv0572c/- | (cc=0.5626) | info on Rv0572c/- |
| Rv3077/- | (cc=0.532) | info on Rv3077/- |
| Rv0551c/fadD8 | (cc=0.5279) | info on Rv0551c/fadD8 |
| Rv2787/- | (cc=0.5235) | info on Rv2787/- |
| Rv3406/- | (cc=0.5187) | info on Rv3406/- |
| Rv0754/PE_PGRS11 | (cc=0.4883) | info on Rv0754/PE_PGRS11 |
| Rv2086/- | (cc=0.4875) | info on Rv2086/- |
| Rv0342/iniA | (cc=0.469) | info on Rv0342/iniA |
| Rv2679/echA15 | (cc=0.4687) | info on Rv2679/echA15 |
Correlation of Rv0443/- with Rv3435c/-
Normalized LFCs for Rv0443/-:
(description and provenance of datasets)
| Rv0443/- | Rv3435c/- | |
| Fe_supp_jason_reseq | -1.07 | 0.38 |
| low_pH_jason_reseq | -0.992 | -1.606 |
| NO_jason_reseq | 0.16 | 0.121 |
| B6_jason_reseq | -0.502 | 0.311 |
| MHCII_jason_reseq | 0.258 | 0.701 |
| Isoniazid02 | -0.627 | -1.359 |
| Rifampicin4 | 0.227 | -1.107 |
| Ethambutol3 | -0.689 | -0.049 |
| Meropenem3 | -0.012 | -1.004 |
| Vancomycin16 | -0.172 | -0.939 |
| Rv2680_day32 | -0.776 | -0.409 |
| H37Rv_KO_MarP | 0.395 | 0.488 |
| hypoxia_3wks | -0.295 | -0.542 |
| hypoxia_6wks | -0.144 | -1.071 |
| glycerol | 0.553 | -0.881 |
| cholesterol | 0.29 | 0.151 |
| AJ | 0.158 | 0.121 |
| Bibs02 | 0.087 | -0.164 |
| Bibs02c | 0.562 | 0.385 |
| BL6 | 0.1 | -0.322 |
| BL6a | 0.175 | -0.235 |
| BXD01 | 0.004 | -0.501 |
| BXD010 | 0.329 | -0.232 |
| BXD011 | -0.44 | -0.345 |
| BXD03 | 0.317 | -0.232 |
| BXD04 | 0.387 | -0.519 |
| BXD05 | -0.138 | -0.323 |
| BXD06 | -0.28 | -0.683 |
| BXD07 | -0.296 | -0.318 |
| BXD08 | -0.211 | -0.516 |
| BXD09 | -0.376 | -0.487 |
| CAST | 0.402 | 0.235 |
| CCcont | 0.14 | -0.363 |
| DS01 | 0.007 | 0.275 |
| DS02 | 0.402 | -0.339 |
| DS04 | 0.526 | 0.174 |
| DS0c | 0.135 | -0.03 |
| GP01 | 0.036 | 0.041 |
| GP02 | 1.148 | 0.585 |
| GP0c | 0.277 | -0.572 |
| NOD | 1.097 | 1.434 |
| NZO | 0.22 | 0.721 |
| PWK | 0.372 | 0.361 |
| H37Rv_KO_CtpC | 0.201 | 0.034 |
| H37Rv_KO_CtpD | -0.256 | 0.429 |
| H37Rv_KO_Rv1272 | -0.224 | -0.065 |
| H37Rv_KO_SugABC | -0.028 | 0.359 |
| H37Rv_KO_MbtN | -0.392 | -0.914 |
| Trans05 | -0.004 | 0.396 |
| macrophage_unactivated | -0.417 | -0.726 |
| IL1 | -0.16 | -0.24 |
| Rapamycin | -0.623 | -0.433 |
| Tcell | -0.248 | -0.802 |
| GMCSF | 0.639 | 0.013 |
| IFNab | -0.417 | -0.713 |
| IFNg | 0.425 | -0.417 |
| IFNg_GMCSF1 | -0.101 | 0.324 |
| Rv1432_day32 | 0.24 | -0.349 |
| Rv1565c_day32 | 0.401 | 0.107 |
| secA2_input | 0.567 | 0.081 |
| delta_Rv3594 | -0.037 | -0.349 |
| delta_Rv3717 | 0.0 | -0.2 |
| delta_Rv3811 | -0.132 | -0.41 |
| delta_Rv0954 | -0.109 | 0.576 |
| PonA1 | 0.139 | -0.435 |
| EccD1_KO | 0.145 | -0.454 |
| EspI_KO | -0.248 | -0.468 |
| PE35_KO | -0.405 | -0.554 |
| PPE68_KO | -0.541 | -0.595 |
| glycerol2 | 0.335 | 0.741 |
| lignocerate | 0.71 | 0.494 |
| oleate | 0.293 | 0.686 |
| phosphatidylcholine | 0.371 | 1.046 |
| acetate | 0.336 | 0.539 |
| glucAc | 0.532 | 0.105 |
| Rv0950ko | 0.157 | -0.036 |
| Rv1096ko | 0.507 | -0.214 |
| Rv3684ko | -0.662 | -0.553 |
| delta_otsA_trehalose | 2.564 | 1.447 |