Top 10 genes with highest correlation to Rv0431/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2190c/- | (cc=0.6494) | info on Rv2190c/- |
| Rv1836c/- | (cc=0.5989) | info on Rv1836c/- |
| Rv3593/lpqF | (cc=0.568) | info on Rv3593/lpqF |
| Rv1565c/- | (cc=0.5621) | info on Rv1565c/- |
| Rv0206c/mmpL3 | (cc=0.5592) | info on Rv0206c/mmpL3 |
| Rv3044/fecB | (cc=0.5577) | info on Rv3044/fecB |
| Rv2363/amiA2 | (cc=0.5458) | info on Rv2363/amiA2 |
| Rv2696c/- | (cc=0.5425) | info on Rv2696c/- |
| Rv2198c/mmpS3 | (cc=0.5398) | info on Rv2198c/mmpS3 |
| Rv1006/- | (cc=0.5397) | info on Rv1006/- |
Correlation of Rv0431/- with Rv2190c/-
Normalized LFCs for Rv0431/-:
(description and provenance of datasets)
| Rv0431/- | Rv2190c/- | |
| Fe_supp_jason_reseq | 0.751 | 2.516 |
| low_pH_jason_reseq | 1.305 | -0.221 |
| NO_jason_reseq | -0.436 | -3.877 |
| B6_jason_reseq | 0.695 | -0.596 |
| MHCII_jason_reseq | 0.0 | -0.565 |
| Isoniazid02 | -2.043 | 0.563 |
| Rifampicin4 | -4.04 | -3.541 |
| Ethambutol3 | -0.832 | -2.182 |
| Meropenem3 | -2.146 | -0.786 |
| Vancomycin16 | -2.918 | -4.51 |
| Rv2680_day32 | 2.141 | 2.417 |
| H37Rv_KO_MarP | -3.466 | -6.0 |
| hypoxia_3wks | -0.439 | -2.767 |
| hypoxia_6wks | -0.075 | -0.228 |
| glycerol | -1.583 | -0.098 |
| cholesterol | 0.082 | 2.214 |
| AJ | -1.193 | -1.276 |
| Bibs02 | 1.477 | 0.993 |
| Bibs02c | 1.117 | 1.306 |
| BL6 | 1.154 | 3.063 |
| BL6a | 1.092 | 2.749 |
| BXD01 | 1.07 | 2.595 |
| BXD010 | 0.328 | 2.438 |
| BXD011 | 0.236 | 2.323 |
| BXD03 | -1.06 | 2.42 |
| BXD04 | 0.878 | 2.446 |
| BXD05 | 0.405 | 3.337 |
| BXD06 | 0.372 | 3.167 |
| BXD07 | 0.533 | 2.933 |
| BXD08 | 1.697 | 2.286 |
| BXD09 | 0.976 | 3.087 |
| CAST | -0.521 | -1.088 |
| CCcont | 2.676 | 3.364 |
| DS01 | 0.38 | 1.001 |
| DS02 | 0.403 | 0.0 |
| DS04 | 2.112 | 1.359 |
| DS0c | 1.724 | 1.298 |
| GP01 | -0.903 | 1.498 |
| GP02 | 0.603 | -0.128 |
| GP0c | -0.342 | 1.031 |
| NOD | -0.952 | -1.061 |
| NZO | -1.124 | -1.263 |
| PWK | -1.009 | -0.786 |
| H37Rv_KO_CtpC | 2.33 | 2.295 |
| H37Rv_KO_CtpD | -0.778 | 1.805 |
| H37Rv_KO_Rv1272 | -1.105 | 2.512 |
| H37Rv_KO_SugABC | 0.972 | 1.815 |
| H37Rv_KO_MbtN | 4.38 | 4.046 |
| Trans05 | -0.295 | 2.172 |
| macrophage_unactivated | 0.761 | 0.076 |
| IL1 | -0.742 | 0.575 |
| Rapamycin | -0.101 | -0.23 |
| Tcell | 1.378 | -0.329 |
| GMCSF | 2.081 | 0.568 |
| IFNab | -0.203 | 1.103 |
| IFNg | -0.567 | 1.563 |
| IFNg_GMCSF1 | -0.104 | 0.575 |
| Rv1432_day32 | 0.488 | 2.996 |
| Rv1565c_day32 | 0.55 | 0.0 |
| secA2_input | -2.829 | -4.612 |
| delta_Rv3594 | 0.84 | 2.299 |
| delta_Rv3717 | 1.47 | 2.896 |
| delta_Rv3811 | -0.086 | 2.019 |
| delta_Rv0954 | -1.55 | 0.358 |
| PonA1 | -0.608 | -0.825 |
| EccD1_KO | -2.611 | -1.766 |
| EspI_KO | -3.268 | -1.634 |
| PE35_KO | -1.978 | -3.246 |
| PPE68_KO | -1.635 | -1.411 |
| glycerol2 | 1.513 | -0.531 |
| lignocerate | 2.66 | -0.462 |
| oleate | -0.248 | -0.537 |
| phosphatidylcholine | 2.507 | -0.531 |
| acetate | 1.127 | 1.15 |
| glucAc | 1.49 | 0.213 |
| Rv0950ko | -3.401 | -6.0 |
| Rv1096ko | -3.402 | -1.176 |
| Rv3684ko | 2.021 | -0.364 |
| delta_otsA_trehalose | 0.081 | 1.066 |