Top 10 genes with highest correlation to Rv0371c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2430c/PPE41 | (cc=0.6897) | info on Rv2430c/PPE41 |
| Rv0930/pstA1 | (cc=0.6789) | info on Rv0930/pstA1 |
| Rv1560/vapB11 | (cc=0.6612) | info on Rv1560/vapB11 |
| Rv0928/pstS3 | (cc=0.631) | info on Rv0928/pstS3 |
| Rv0820/phoT | (cc=0.6283) | info on Rv0820/phoT |
| Rv3278c/- | (cc=0.6117) | info on Rv3278c/- |
| Rv0822c/- | (cc=0.6069) | info on Rv0822c/- |
| Rv0929/pstC2 | (cc=0.6036) | info on Rv0929/pstC2 |
| Rv1505c/- | (cc=0.5955) | info on Rv1505c/- |
| Rv3166c/- | (cc=0.589) | info on Rv3166c/- |
Correlation of Rv0371c/- with Rv2430c/PPE41
Normalized LFCs for Rv0371c/-:
(description and provenance of datasets)
| Rv0371c/- | Rv2430c/PPE41 | |
| Fe_supp_jason_reseq | -0.439 | -0.259 |
| low_pH_jason_reseq | -0.776 | -0.617 |
| NO_jason_reseq | -0.614 | -0.326 |
| B6_jason_reseq | -1.467 | -0.565 |
| MHCII_jason_reseq | -1.383 | -1.222 |
| Isoniazid02 | 0.201 | -0.362 |
| Rifampicin4 | 0.0 | -0.379 |
| Ethambutol3 | 0.0 | -0.539 |
| Meropenem3 | 0.0 | 0.604 |
| Vancomycin16 | 0.366 | -0.541 |
| Rv2680_day32 | -0.363 | -0.546 |
| H37Rv_KO_MarP | 0.0 | 0.78 |
| hypoxia_3wks | 0.335 | -0.016 |
| hypoxia_6wks | -0.317 | -0.558 |
| glycerol | 0.385 | -1.482 |
| cholesterol | -0.216 | -0.355 |
| AJ | 1.334 | 1.329 |
| Bibs02 | -0.775 | 0.293 |
| Bibs02c | 1.914 | -0.441 |
| BL6 | 4.166 | 2.014 |
| BL6a | 2.574 | 1.624 |
| BXD01 | 2.329 | 1.73 |
| BXD010 | 3.1 | 2.268 |
| BXD011 | 2.844 | 2.003 |
| BXD03 | 2.737 | 2.085 |
| BXD04 | 1.656 | 2.116 |
| BXD05 | 1.852 | 2.269 |
| BXD06 | 1.957 | 1.836 |
| BXD07 | 2.64 | 1.829 |
| BXD08 | 1.702 | 1.59 |
| BXD09 | 2.582 | 1.891 |
| CAST | 2.478 | 1.024 |
| CCcont | 1.97 | 1.659 |
| DS01 | 1.627 | 1.092 |
| DS02 | 0.972 | 0.558 |
| DS04 | -0.628 | 0.769 |
| DS0c | 0.869 | 0.509 |
| GP01 | 0.067 | 0.134 |
| GP02 | 2.203 | 2.462 |
| GP0c | 1.861 | 0.343 |
| NOD | 4.59 | 1.447 |
| NZO | 0.6 | 0.483 |
| PWK | -0.142 | 0.872 |
| H37Rv_KO_CtpC | 0.309 | 0.914 |
| H37Rv_KO_CtpD | 0.0 | 1.252 |
| H37Rv_KO_Rv1272 | 0.811 | 1.399 |
| H37Rv_KO_SugABC | -0.321 | 1.91 |
| H37Rv_KO_MbtN | 2.275 | 1.129 |
| Trans05 | 0.459 | 2.226 |
| macrophage_unactivated | 0.227 | 1.076 |
| IL1 | 0.214 | 0.125 |
| Rapamycin | 0.512 | 0.19 |
| Tcell | 0.326 | 0.094 |
| GMCSF | 0.895 | 0.636 |
| IFNab | 0.302 | 0.308 |
| IFNg | -0.243 | 0.537 |
| IFNg_GMCSF1 | -0.591 | 0.688 |
| Rv1432_day32 | 0.0 | -0.428 |
| Rv1565c_day32 | 0.0 | 0.782 |
| secA2_input | -0.47 | -0.891 |
| delta_Rv3594 | -0.572 | -0.571 |
| delta_Rv3717 | 0.287 | -1.178 |
| delta_Rv3811 | -1.096 | -0.265 |
| delta_Rv0954 | -2.335 | -1.172 |
| PonA1 | -1.928 | -0.066 |
| EccD1_KO | -0.898 | -0.625 |
| EspI_KO | -0.451 | -0.331 |
| PE35_KO | -0.3 | -0.726 |
| PPE68_KO | -0.163 | -0.701 |
| glycerol2 | -0.97 | -0.084 |
| lignocerate | 0.0 | -0.073 |
| oleate | -2.741 | 0.234 |
| phosphatidylcholine | -1.307 | 0.041 |
| acetate | 0.0 | 0.017 |
| glucAc | 0.0 | -0.627 |
| Rv0950ko | -1.122 | -0.136 |
| Rv1096ko | 0.38 | -0.22 |
| Rv3684ko | -0.452 | -0.508 |
| delta_otsA_trehalose | 0.0 | 1.428 |