Top 10 genes with highest correlation to Rv0342/iniA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0968/- | (cc=0.6427) | info on Rv0968/- |
| Rv2679/echA15 | (cc=0.6294) | info on Rv2679/echA15 |
| Rv3329/- | (cc=0.6205) | info on Rv3329/- |
| Rv0160c/PE4 | (cc=0.6199) | info on Rv0160c/PE4 |
| Rv0940c/- | (cc=0.5886) | info on Rv0940c/- |
| Rv3312c/- | (cc=0.587) | info on Rv3312c/- |
| Rv3508/PE_PGRS54 | (cc=0.5785) | info on Rv3508/PE_PGRS54 |
| Rv0399c/lpqK | (cc=0.578) | info on Rv0399c/lpqK |
| Rv0115/hddA | (cc=0.5757) | info on Rv0115/hddA |
| Rv3406/- | (cc=0.5703) | info on Rv3406/- |
Correlation of Rv0342/iniA with Rv0968/-
Normalized LFCs for Rv0342/iniA:
(description and provenance of datasets)
| Rv0342/iniA | Rv0968/- | |
| Fe_supp_jason_reseq | -0.583 | 0.704 |
| low_pH_jason_reseq | -0.781 | -0.738 |
| NO_jason_reseq | 0.795 | 0.423 |
| B6_jason_reseq | 0.252 | 0.01 |
| MHCII_jason_reseq | 0.5 | 0.27 |
| Isoniazid02 | -2.219 | -3.296 |
| Rifampicin4 | 0.33 | 0.831 |
| Ethambutol3 | -2.382 | -2.914 |
| Meropenem3 | -1.242 | -3.018 |
| Vancomycin16 | -0.7 | -1.112 |
| Rv2680_day32 | -0.18 | 0.91 |
| H37Rv_KO_MarP | 0.368 | 0.883 |
| hypoxia_3wks | -0.112 | -0.203 |
| hypoxia_6wks | -0.535 | -1.349 |
| glycerol | 0.532 | 0.677 |
| cholesterol | 0.446 | 0.845 |
| AJ | 0.765 | 0.528 |
| Bibs02 | 0.009 | -0.278 |
| Bibs02c | -0.656 | 0.671 |
| BL6 | -0.238 | -0.789 |
| BL6a | -0.331 | -0.393 |
| BXD01 | -0.119 | -0.379 |
| BXD010 | -0.076 | -0.019 |
| BXD011 | 0.106 | -0.923 |
| BXD03 | 0.207 | -0.794 |
| BXD04 | 0.058 | -0.426 |
| BXD05 | 0.414 | 0.48 |
| BXD06 | 0.387 | -0.954 |
| BXD07 | -0.097 | -0.699 |
| BXD08 | 0.05 | -0.379 |
| BXD09 | -0.062 | -0.542 |
| CAST | 0.322 | 0.265 |
| CCcont | -0.276 | -0.929 |
| DS01 | -0.477 | -0.469 |
| DS02 | 0.221 | 0.635 |
| DS04 | -0.646 | 0.093 |
| DS0c | 0.489 | -0.211 |
| GP01 | 0.527 | 0.345 |
| GP02 | 0.28 | -0.744 |
| GP0c | 0.068 | -0.329 |
| NOD | 0.042 | 0.885 |
| NZO | 0.549 | -0.27 |
| PWK | 0.517 | -0.254 |
| H37Rv_KO_CtpC | 0.207 | -0.14 |
| H37Rv_KO_CtpD | -0.05 | 1.622 |
| H37Rv_KO_Rv1272 | 0.588 | 1.062 |
| H37Rv_KO_SugABC | 0.512 | 0.86 |
| H37Rv_KO_MbtN | 0.24 | -1.047 |
| Trans05 | 0.793 | -0.921 |
| macrophage_unactivated | -0.429 | -0.843 |
| IL1 | -0.35 | -0.946 |
| Rapamycin | 0.147 | -1.105 |
| Tcell | -0.081 | -0.472 |
| GMCSF | -0.312 | -0.055 |
| IFNab | 0.239 | -0.13 |
| IFNg | -0.155 | -0.516 |
| IFNg_GMCSF1 | 0.176 | -0.569 |
| Rv1432_day32 | 0.186 | -0.215 |
| Rv1565c_day32 | 0.39 | 0.445 |
| secA2_input | 0.564 | 1.842 |
| delta_Rv3594 | -0.509 | 0.096 |
| delta_Rv3717 | -0.352 | -0.593 |
| delta_Rv3811 | -0.495 | -0.167 |
| delta_Rv0954 | -0.351 | -0.105 |
| PonA1 | -0.163 | 1.324 |
| EccD1_KO | 0.023 | 1.237 |
| EspI_KO | -0.522 | -0.074 |
| PE35_KO | -0.292 | 0.111 |
| PPE68_KO | -0.659 | -0.192 |
| glycerol2 | 0.423 | 0.146 |
| lignocerate | 0.66 | 0.072 |
| oleate | 0.461 | 0.18 |
| phosphatidylcholine | 0.391 | 0.326 |
| acetate | 0.632 | 0.352 |
| glucAc | 0.381 | 0.061 |
| Rv0950ko | 0.286 | 0.458 |
| Rv1096ko | 0.531 | 1.2 |
| Rv3684ko | 0.311 | 0.652 |
| delta_otsA_trehalose | 1.165 | 1.843 |