Top 10 genes with highest correlation to Rv0302/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0378/- | (cc=0.5289) | info on Rv0378/- |
| Rv2369c/- | (cc=0.5256) | info on Rv2369c/- |
| Rv1765A/- | (cc=0.5237) | info on Rv1765A/- |
| Rv2365c/- | (cc=0.4929) | info on Rv2365c/- |
| Rv0870c/- | (cc=0.4841) | info on Rv0870c/- |
| Rv3748/- | (cc=0.4778) | info on Rv3748/- |
| Rv2426c/- | (cc=0.476) | info on Rv2426c/- |
| Rv0604/lpqO | (cc=0.4756) | info on Rv0604/lpqO |
| Rv3628/ppa | (cc=0.4669) | info on Rv3628/ppa |
| Rv0755c/PPE12 | (cc=0.4605) | info on Rv0755c/PPE12 |
Correlation of Rv0302/- with Rv0378/-
Normalized LFCs for Rv0302/-:
(description and provenance of datasets)
| Rv0302/- | Rv0378/- | |
| Fe_supp_jason_reseq | -0.903 | -0.905 |
| low_pH_jason_reseq | -0.549 | 0.348 |
| NO_jason_reseq | -0.079 | 0.129 |
| B6_jason_reseq | -0.488 | 2.647 |
| MHCII_jason_reseq | 0.451 | 0.024 |
| Isoniazid02 | 0.287 | 0.691 |
| Rifampicin4 | -0.639 | 0.831 |
| Ethambutol3 | -0.382 | 0.249 |
| Meropenem3 | -0.007 | -1.058 |
| Vancomycin16 | 0.101 | 0.31 |
| Rv2680_day32 | -0.199 | -1.357 |
| H37Rv_KO_MarP | 0.288 | 1.101 |
| hypoxia_3wks | -0.431 | -0.379 |
| hypoxia_6wks | 0.257 | -0.301 |
| glycerol | 0.332 | -0.124 |
| cholesterol | 0.022 | -0.115 |
| AJ | 0.343 | 0.529 |
| Bibs02 | 0.513 | 1.779 |
| Bibs02c | 0.876 | 0.94 |
| BL6 | -0.038 | -1.203 |
| BL6a | 0.456 | -0.514 |
| BXD01 | -0.045 | -1.876 |
| BXD010 | -0.279 | -0.854 |
| BXD011 | 0.415 | -0.659 |
| BXD03 | 0.665 | -0.211 |
| BXD04 | -0.165 | -0.64 |
| BXD05 | -0.293 | -1.511 |
| BXD06 | 0.02 | -2.016 |
| BXD07 | 0.051 | -1.113 |
| BXD08 | -0.093 | -0.194 |
| BXD09 | -0.152 | -1.03 |
| CAST | -0.267 | 1.865 |
| CCcont | 0.414 | -0.436 |
| DS01 | 0.017 | 0.32 |
| DS02 | 0.722 | 0.682 |
| DS04 | 0.299 | -2.228 |
| DS0c | 0.677 | 0.357 |
| GP01 | -0.277 | -2.491 |
| GP02 | -1.403 | -1.458 |
| GP0c | -0.296 | -1.223 |
| NOD | -0.939 | 0.075 |
| NZO | -0.231 | 0.637 |
| PWK | -0.392 | 0.526 |
| H37Rv_KO_CtpC | -0.095 | 0.488 |
| H37Rv_KO_CtpD | 0.606 | -0.261 |
| H37Rv_KO_Rv1272 | 0.444 | -3.431 |
| H37Rv_KO_SugABC | -1.377 | -2.499 |
| H37Rv_KO_MbtN | -0.778 | 1.48 |
| Trans05 | 0.005 | -3.297 |
| macrophage_unactivated | -0.679 | -0.524 |
| IL1 | -0.377 | -1.569 |
| Rapamycin | -1.022 | -2.612 |
| Tcell | -0.179 | -0.593 |
| GMCSF | 0.063 | 1.188 |
| IFNab | -0.55 | -1.599 |
| IFNg | -0.16 | -0.278 |
| IFNg_GMCSF1 | -0.657 | -0.946 |
| Rv1432_day32 | 0.694 | 0.0 |
| Rv1565c_day32 | -0.114 | -1.579 |
| secA2_input | 0.495 | 1.711 |
| delta_Rv3594 | -1.358 | -2.743 |
| delta_Rv3717 | -1.286 | -2.078 |
| delta_Rv3811 | -1.93 | -6.0 |
| delta_Rv0954 | -0.933 | -2.875 |
| PonA1 | -1.113 | -2.688 |
| EccD1_KO | -0.217 | 0.095 |
| EspI_KO | 0.0 | 1.035 |
| PE35_KO | 0.184 | 0.636 |
| PPE68_KO | 0.256 | 0.534 |
| glycerol2 | 0.894 | 0.68 |
| lignocerate | 1.447 | 1.808 |
| oleate | -0.343 | 0.0 |
| phosphatidylcholine | 0.805 | 0.819 |
| acetate | 0.579 | 3.139 |
| glucAc | 0.801 | 2.721 |
| Rv0950ko | 0.706 | -0.54 |
| Rv1096ko | 0.187 | -0.971 |
| Rv3684ko | 0.069 | -2.414 |
| delta_otsA_trehalose | 0.148 | 0.468 |