Top 10 genes with highest correlation to Rv0195/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0144/- | (cc=0.5278) | info on Rv0144/- |
| Rv2446c/- | (cc=0.5041) | info on Rv2446c/- |
| Rv3840/- | (cc=0.5004) | info on Rv3840/- |
| Rv3710/leuA | (cc=0.495) | info on Rv3710/leuA |
| Rv2443/dctA | (cc=0.4672) | info on Rv2443/dctA |
| Rv0477/- | (cc=0.4615) | info on Rv0477/- |
| Rv0397A/- | (cc=0.4611) | info on Rv0397A/- |
| Rv3043c/ctaD | (cc=0.4531) | info on Rv3043c/ctaD |
| Rv3218/- | (cc=0.4249) | info on Rv3218/- |
| Rv0701/rplC | (cc=0.412) | info on Rv0701/rplC |
Correlation of Rv0195/- with Rv0144/-
Normalized LFCs for Rv0195/-:
(description and provenance of datasets)
| Rv0195/- | Rv0144/- | |
| Fe_supp_jason_reseq | 0.548 | 0.106 |
| low_pH_jason_reseq | -1.151 | -0.88 |
| NO_jason_reseq | -0.202 | -0.858 |
| B6_jason_reseq | 0.657 | -0.045 |
| MHCII_jason_reseq | 0.35 | 0.441 |
| Isoniazid02 | -0.761 | -0.923 |
| Rifampicin4 | -0.734 | -0.217 |
| Ethambutol3 | -0.812 | -0.303 |
| Meropenem3 | -0.359 | 0.611 |
| Vancomycin16 | -0.411 | -0.966 |
| Rv2680_day32 | 0.043 | 0.026 |
| H37Rv_KO_MarP | 0.515 | -0.021 |
| hypoxia_3wks | -0.263 | 0.179 |
| hypoxia_6wks | 0.04 | 0.077 |
| glycerol | -0.208 | -0.888 |
| cholesterol | -0.314 | -0.69 |
| AJ | 0.129 | -0.351 |
| Bibs02 | 0.072 | -0.024 |
| Bibs02c | -0.641 | 0.526 |
| BL6 | -0.558 | -0.711 |
| BL6a | 0.014 | -0.148 |
| BXD01 | -0.735 | 0.252 |
| BXD010 | 0.867 | -0.398 |
| BXD011 | 0.162 | -0.325 |
| BXD03 | -0.41 | -0.464 |
| BXD04 | 0.118 | 0.449 |
| BXD05 | 0.135 | 0.0 |
| BXD06 | 0.0 | 0.032 |
| BXD07 | 0.325 | -0.339 |
| BXD08 | -0.197 | -0.021 |
| BXD09 | 0.307 | -0.133 |
| CAST | -0.571 | 0.384 |
| CCcont | -1.071 | -0.83 |
| DS01 | 0.352 | -0.089 |
| DS02 | 0.44 | 0.178 |
| DS04 | -0.356 | 0.288 |
| DS0c | 0.487 | 1.087 |
| GP01 | -0.396 | 0.784 |
| GP02 | 1.316 | 1.281 |
| GP0c | -0.23 | -0.116 |
| NOD | -0.869 | -0.024 |
| NZO | -0.215 | 0.407 |
| PWK | 0.917 | 0.117 |
| H37Rv_KO_CtpC | 0.14 | 0.349 |
| H37Rv_KO_CtpD | 0.101 | 0.388 |
| H37Rv_KO_Rv1272 | 0.277 | 0.721 |
| H37Rv_KO_SugABC | 0.662 | 0.593 |
| H37Rv_KO_MbtN | 0.578 | -0.089 |
| Trans05 | -0.271 | 0.154 |
| macrophage_unactivated | -0.161 | -0.543 |
| IL1 | -0.044 | 0.409 |
| Rapamycin | -0.31 | -0.601 |
| Tcell | -0.228 | -0.042 |
| GMCSF | 0.132 | 0.256 |
| IFNab | 0.218 | -0.81 |
| IFNg | 0.056 | -0.23 |
| IFNg_GMCSF1 | 0.676 | 0.163 |
| Rv1432_day32 | 0.043 | 1.115 |
| Rv1565c_day32 | 0.101 | 0.714 |
| secA2_input | 0.736 | 0.091 |
| delta_Rv3594 | -0.901 | -0.705 |
| delta_Rv3717 | -0.675 | -0.131 |
| delta_Rv3811 | -0.522 | -0.112 |
| delta_Rv0954 | 0.578 | 0.154 |
| PonA1 | 0.142 | 0.083 |
| EccD1_KO | -0.799 | -0.641 |
| EspI_KO | -0.904 | -0.93 |
| PE35_KO | -1.272 | -0.96 |
| PPE68_KO | -1.136 | -1.065 |
| glycerol2 | -0.844 | -0.425 |
| lignocerate | -0.851 | -0.63 |
| oleate | -0.119 | 0.095 |
| phosphatidylcholine | -1.08 | -0.164 |
| acetate | -0.826 | -1.009 |
| glucAc | -0.683 | -1.246 |
| Rv0950ko | 0.1 | 0.507 |
| Rv1096ko | -0.268 | 0.084 |
| Rv3684ko | -0.547 | 0.193 |
| delta_otsA_trehalose | 0.138 | -0.144 |