Top 10 genes with highest correlation to Rv0147/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1411c/lprG | (cc=0.4297) | info on Rv1411c/lprG |
| Rv1780/- | (cc=0.4268) | info on Rv1780/- |
| Rv3784/- | (cc=0.4248) | info on Rv3784/- |
| Rv1892/- | (cc=0.416) | info on Rv1892/- |
| Rv2351c/plcA | (cc=0.4046) | info on Rv2351c/plcA |
| Rv1885c/- | (cc=0.4036) | info on Rv1885c/- |
| Rv0207c/- | (cc=0.3923) | info on Rv0207c/- |
| Rv3486/- | (cc=0.3898) | info on Rv3486/- |
| Rv0473/- | (cc=0.3815) | info on Rv0473/- |
| Rv0476/- | (cc=0.3814) | info on Rv0476/- |
Correlation of Rv0147/- with Rv1411c/lprG
Normalized LFCs for Rv0147/-:
(description and provenance of datasets)
| Rv0147/- | Rv1411c/lprG | |
| Fe_supp_jason_reseq | 0.919 | 3.964 |
| low_pH_jason_reseq | -1.782 | 0.0 |
| NO_jason_reseq | -1.129 | 0.0 |
| B6_jason_reseq | -0.01 | 0.0 |
| MHCII_jason_reseq | 1.187 | 0.0 |
| Isoniazid02 | 0.639 | 1.312 |
| Rifampicin4 | -0.777 | -6.0 |
| Ethambutol3 | 0.246 | -2.503 |
| Meropenem3 | 0.262 | -2.344 |
| Vancomycin16 | -0.584 | -6.0 |
| Rv2680_day32 | 0.786 | 0.0 |
| H37Rv_KO_MarP | 0.13 | -4.73 |
| hypoxia_3wks | 1.069 | 1.176 |
| hypoxia_6wks | 0.9 | 1.725 |
| glycerol | 1.162 | 4.535 |
| cholesterol | 0.14 | 2.347 |
| AJ | 0.355 | -0.815 |
| Bibs02 | -0.318 | -0.642 |
| Bibs02c | 0.194 | -0.735 |
| BL6 | -0.157 | -0.315 |
| BL6a | 0.066 | -0.154 |
| BXD01 | 0.268 | -0.458 |
| BXD010 | 0.521 | -0.45 |
| BXD011 | -0.06 | 0.258 |
| BXD03 | 0.352 | -0.475 |
| BXD04 | 0.385 | -0.434 |
| BXD05 | 0.15 | 0.0 |
| BXD06 | 0.0 | -0.469 |
| BXD07 | 0.133 | -0.486 |
| BXD08 | 0.287 | -0.467 |
| BXD09 | -0.073 | -0.494 |
| CAST | -0.459 | -0.809 |
| CCcont | -0.013 | 3.583 |
| DS01 | -1.193 | -0.83 |
| DS02 | 0.235 | -0.764 |
| DS04 | -1.649 | 0.822 |
| DS0c | -0.965 | -0.762 |
| GP01 | 0.615 | -0.249 |
| GP02 | 0.963 | -0.292 |
| GP0c | 0.729 | 1.392 |
| NOD | -0.029 | -0.789 |
| NZO | 0.465 | -0.701 |
| PWK | 0.959 | -0.689 |
| H37Rv_KO_CtpC | -0.135 | 0.606 |
| H37Rv_KO_CtpD | 0.132 | 0.473 |
| H37Rv_KO_Rv1272 | 0.255 | -0.356 |
| H37Rv_KO_SugABC | -0.069 | 0.718 |
| H37Rv_KO_MbtN | 1.51 | 1.904 |
| Trans05 | 0.593 | -0.21 |
| macrophage_unactivated | 0.11 | -1.016 |
| IL1 | -1.02 | -0.955 |
| Rapamycin | 0.288 | 0.0 |
| Tcell | -0.795 | -1.049 |
| GMCSF | 0.119 | 0.0 |
| IFNab | 1.366 | 3.304 |
| IFNg | -0.494 | -1.563 |
| IFNg_GMCSF1 | -0.597 | -1.012 |
| Rv1432_day32 | 0.619 | -1.106 |
| Rv1565c_day32 | 0.693 | 0.0 |
| secA2_input | 0.094 | 1.331 |
| delta_Rv3594 | -0.038 | 1.49 |
| delta_Rv3717 | 0.233 | 2.768 |
| delta_Rv3811 | 0.175 | 0.953 |
| delta_Rv0954 | -0.173 | -3.981 |
| PonA1 | -0.5 | -2.838 |
| EccD1_KO | -0.562 | -2.746 |
| EspI_KO | -0.756 | -2.484 |
| PE35_KO | -0.951 | -2.789 |
| PPE68_KO | -0.934 | -2.7 |
| glycerol2 | 1.251 | 0.0 |
| lignocerate | 0.857 | 0.0 |
| oleate | 0.571 | 0.0 |
| phosphatidylcholine | 0.472 | 0.0 |
| acetate | 0.346 | 0.0 |
| glucAc | 0.194 | 0.392 |
| Rv0950ko | 0.075 | 0.193 |
| Rv1096ko | -0.377 | -0.41 |
| Rv3684ko | -0.357 | 1.189 |
| delta_otsA_trehalose | -0.577 | -0.468 |