Top 10 genes with highest correlation to Rv0140/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3576/lppH | (cc=0.4595) | info on Rv3576/lppH |
| Rv0198c/zmp1 | (cc=0.4388) | info on Rv0198c/zmp1 |
| Rv3813c/- | (cc=0.435) | info on Rv3813c/- |
| Rv1925/fadD31 | (cc=0.4289) | info on Rv1925/fadD31 |
| Rv2243/fabD | (cc=0.4233) | info on Rv2243/fabD |
| Rv1923/lipD | (cc=0.4057) | info on Rv1923/lipD |
| Rv0572c/- | (cc=0.3972) | info on Rv0572c/- |
| Rv1604/impA | (cc=0.3941) | info on Rv1604/impA |
| Rv0104/- | (cc=0.3929) | info on Rv0104/- |
| Rv1981c/nrdF1 | (cc=0.3888) | info on Rv1981c/nrdF1 |
Correlation of Rv0140/- with Rv3576/lppH
Normalized LFCs for Rv0140/-:
(description and provenance of datasets)
| Rv0140/- | Rv3576/lppH | |
| Fe_supp_jason_reseq | -0.043 | -0.753 |
| low_pH_jason_reseq | 0.258 | 0.35 |
| NO_jason_reseq | 0.095 | 0.029 |
| B6_jason_reseq | 0.473 | -0.579 |
| MHCII_jason_reseq | 0.738 | 0.829 |
| Isoniazid02 | -0.511 | -0.544 |
| Rifampicin4 | -0.108 | -0.319 |
| Ethambutol3 | -0.254 | -0.775 |
| Meropenem3 | -0.273 | -0.581 |
| Vancomycin16 | -0.042 | -0.342 |
| Rv2680_day32 | -0.291 | -0.152 |
| H37Rv_KO_MarP | -0.075 | -0.037 |
| hypoxia_3wks | -0.032 | -0.419 |
| hypoxia_6wks | -0.017 | -0.129 |
| glycerol | 0.414 | 0.149 |
| cholesterol | 0.68 | 0.164 |
| AJ | -0.734 | 0.19 |
| Bibs02 | 0.123 | -0.23 |
| Bibs02c | 0.049 | 0.682 |
| BL6 | -0.376 | -0.245 |
| BL6a | 0.552 | 0.354 |
| BXD01 | 0.723 | 0.075 |
| BXD010 | 0.591 | -0.137 |
| BXD011 | 2.057 | 0.114 |
| BXD03 | 0.804 | 0.622 |
| BXD04 | 0.305 | 0.101 |
| BXD05 | 0.039 | 0.604 |
| BXD06 | 0.126 | 0.546 |
| BXD07 | 0.277 | 0.316 |
| BXD08 | 0.167 | 0.312 |
| BXD09 | 0.22 | 0.148 |
| CAST | 0.382 | 0.077 |
| CCcont | 0.076 | 0.309 |
| DS01 | 0.014 | 0.0 |
| DS02 | -0.621 | -0.173 |
| DS04 | -0.343 | -0.703 |
| DS0c | 0.515 | 0.539 |
| GP01 | 0.668 | 0.527 |
| GP02 | 0.757 | -0.43 |
| GP0c | -0.062 | -0.534 |
| NOD | -0.08 | 0.254 |
| NZO | 0.023 | 0.225 |
| PWK | -0.216 | -0.085 |
| H37Rv_KO_CtpC | 0.431 | 0.146 |
| H37Rv_KO_CtpD | -0.832 | -1.868 |
| H37Rv_KO_Rv1272 | 0.662 | 1.39 |
| H37Rv_KO_SugABC | 0.697 | 1.149 |
| H37Rv_KO_MbtN | -0.688 | 0.052 |
| Trans05 | 0.574 | 0.873 |
| macrophage_unactivated | -0.407 | 0.669 |
| IL1 | -0.383 | 0.0 |
| Rapamycin | -0.325 | 0.061 |
| Tcell | -0.274 | -0.065 |
| GMCSF | -0.523 | 0.053 |
| IFNab | -0.148 | 0.692 |
| IFNg | -0.206 | -0.334 |
| IFNg_GMCSF1 | -0.5 | -1.131 |
| Rv1432_day32 | -0.064 | -0.087 |
| Rv1565c_day32 | -0.73 | -0.802 |
| secA2_input | -0.778 | 0.357 |
| delta_Rv3594 | -0.054 | -0.049 |
| delta_Rv3717 | -0.445 | -1.354 |
| delta_Rv3811 | 0.665 | -0.654 |
| delta_Rv0954 | 0.253 | -0.478 |
| PonA1 | 0.339 | -0.321 |
| EccD1_KO | -0.559 | -1.276 |
| EspI_KO | -0.26 | -0.739 |
| PE35_KO | -0.193 | -0.376 |
| PPE68_KO | -0.659 | -0.598 |
| glycerol2 | 0.562 | 0.018 |
| lignocerate | 0.69 | 0.075 |
| oleate | 0.448 | 0.052 |
| phosphatidylcholine | 0.268 | 0.472 |
| acetate | 0.216 | -0.151 |
| glucAc | 0.222 | -0.067 |
| Rv0950ko | 0.184 | 0.633 |
| Rv1096ko | 0.558 | 0.142 |
| Rv3684ko | 0.606 | 0.724 |
| delta_otsA_trehalose | 0.52 | -0.15 |