Top 10 genes with highest correlation to Rv0121c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0255c/cobQ1 | (cc=0.4735) | info on Rv0255c/cobQ1 |
| Rv0578c/PE_PGRS7 | (cc=0.4405) | info on Rv0578c/PE_PGRS7 |
| Rv0701/rplC | (cc=0.4293) | info on Rv0701/rplC |
| Rv0394c/- | (cc=0.4292) | info on Rv0394c/- |
| Rv3456c/rplQ | (cc=0.4272) | info on Rv3456c/rplQ |
| Rv3539/PPE63 | (cc=0.4215) | info on Rv3539/PPE63 |
| Rv1546/- | (cc=0.4195) | info on Rv1546/- |
| Rv2597/- | (cc=0.4158) | info on Rv2597/- |
| Rv0741/- | (cc=0.4131) | info on Rv0741/- |
| Rv0540/- | (cc=0.403) | info on Rv0540/- |
Correlation of Rv0121c/- with Rv0255c/cobQ1
Normalized LFCs for Rv0121c/-:
(description and provenance of datasets)
| Rv0121c/- | Rv0255c/cobQ1 | |
| Fe_supp_jason_reseq | -0.979 | 0.267 |
| low_pH_jason_reseq | -0.591 | -1.651 |
| NO_jason_reseq | 0.78 | -0.819 |
| B6_jason_reseq | 0.479 | -0.721 |
| MHCII_jason_reseq | -0.555 | 0.037 |
| Isoniazid02 | -0.102 | 0.713 |
| Rifampicin4 | 1.053 | 0.33 |
| Ethambutol3 | 0.536 | 0.422 |
| Meropenem3 | 0.041 | -0.26 |
| Vancomycin16 | 0.265 | -0.029 |
| Rv2680_day32 | 1.08 | 0.496 |
| H37Rv_KO_MarP | 1.411 | 0.392 |
| hypoxia_3wks | 1.021 | 0.355 |
| hypoxia_6wks | 0.572 | -0.065 |
| glycerol | 0.677 | 0.872 |
| cholesterol | 0.328 | -0.631 |
| AJ | -0.674 | -0.055 |
| Bibs02 | 0.592 | -0.521 |
| Bibs02c | 0.931 | 1.293 |
| BL6 | -0.623 | -0.967 |
| BL6a | 0.237 | 0.443 |
| BXD01 | -0.351 | 0.0 |
| BXD010 | -1.411 | -0.679 |
| BXD011 | 1.449 | 1.291 |
| BXD03 | -1.212 | 0.093 |
| BXD04 | 0.28 | -0.242 |
| BXD05 | 0.216 | -0.244 |
| BXD06 | 0.082 | -0.242 |
| BXD07 | 0.205 | -0.175 |
| BXD08 | 0.659 | 0.046 |
| BXD09 | -0.241 | -0.422 |
| CAST | -0.19 | -0.055 |
| CCcont | -0.821 | -0.11 |
| DS01 | 0.248 | -0.428 |
| DS02 | -0.677 | -0.586 |
| DS04 | -0.822 | -0.408 |
| DS0c | 0.165 | -0.456 |
| GP01 | -0.373 | 0.667 |
| GP02 | -0.333 | 0.066 |
| GP0c | 1.286 | 0.561 |
| NOD | 1.067 | -0.439 |
| NZO | -0.032 | -0.173 |
| PWK | 0.091 | 0.0 |
| H37Rv_KO_CtpC | -0.85 | 0.075 |
| H37Rv_KO_CtpD | -0.567 | -0.575 |
| H37Rv_KO_Rv1272 | 0.373 | 0.082 |
| H37Rv_KO_SugABC | 0.836 | 1.487 |
| H37Rv_KO_MbtN | 0.5 | -0.877 |
| Trans05 | 0.594 | 0.746 |
| macrophage_unactivated | 0.0 | -0.83 |
| IL1 | -0.78 | -0.042 |
| Rapamycin | -0.89 | -0.043 |
| Tcell | -1.496 | -0.59 |
| GMCSF | -1.46 | 1.618 |
| IFNab | -1.388 | -0.221 |
| IFNg | -0.845 | -0.484 |
| IFNg_GMCSF1 | 0.396 | 1.81 |
| Rv1432_day32 | 0.0 | -0.661 |
| Rv1565c_day32 | 2.393 | 0.591 |
| secA2_input | 1.65 | 0.02 |
| delta_Rv3594 | 0.349 | -0.384 |
| delta_Rv3717 | 0.788 | -0.462 |
| delta_Rv3811 | -0.996 | -0.564 |
| delta_Rv0954 | -0.138 | -0.607 |
| PonA1 | 0.869 | 0.424 |
| EccD1_KO | 0.224 | -1.016 |
| EspI_KO | -1.894 | -2.145 |
| PE35_KO | -1.686 | -1.578 |
| PPE68_KO | -1.917 | -2.093 |
| glycerol2 | -0.195 | -0.51 |
| lignocerate | -1.28 | -0.953 |
| oleate | 0.461 | -0.57 |
| phosphatidylcholine | -0.048 | -0.874 |
| acetate | -0.421 | -1.536 |
| glucAc | -1.017 | -0.615 |
| Rv0950ko | 0.513 | -0.133 |
| Rv1096ko | 1.131 | 0.127 |
| Rv3684ko | 0.357 | 0.239 |
| delta_otsA_trehalose | 0.78 | 1.593 |