Top 10 genes with highest correlation to Rv0110/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3366/spoU | (cc=0.6478) | info on Rv3366/spoU |
| Rv0359/- | (cc=0.6461) | info on Rv0359/- |
| Rv3897c/- | (cc=0.614) | info on Rv3897c/- |
| Rv2490c/PE_PGRS43 | (cc=0.6117) | info on Rv2490c/PE_PGRS43 |
| Rv2414c/- | (cc=0.5556) | info on Rv2414c/- |
| Rv2755c/hsdS.1 | (cc=0.5495) | info on Rv2755c/hsdS.1 |
| Rv0836c/- | (cc=0.547) | info on Rv0836c/- |
| Rv0271c/fadE6 | (cc=0.5323) | info on Rv0271c/fadE6 |
| Rv2405/- | (cc=0.5293) | info on Rv2405/- |
| Rv0376c/- | (cc=0.528) | info on Rv0376c/- |
Correlation of Rv0110/- with Rv3366/spoU
Normalized LFCs for Rv0110/-:
(description and provenance of datasets)
| Rv0110/- | Rv3366/spoU | |
| Fe_supp_jason_reseq | -0.406 | -1.345 |
| low_pH_jason_reseq | -0.306 | -1.36 |
| NO_jason_reseq | -0.226 | 0.94 |
| B6_jason_reseq | 0.395 | 0.179 |
| MHCII_jason_reseq | 0.614 | 0.919 |
| Isoniazid02 | 0.052 | -0.556 |
| Rifampicin4 | 0.054 | 0.793 |
| Ethambutol3 | 0.731 | -0.154 |
| Meropenem3 | -0.05 | 0.381 |
| Vancomycin16 | 0.191 | -0.138 |
| Rv2680_day32 | 0.914 | -0.683 |
| H37Rv_KO_MarP | -0.085 | 1.012 |
| hypoxia_3wks | -0.562 | -0.463 |
| hypoxia_6wks | -0.351 | -0.662 |
| glycerol | 0.614 | 0.563 |
| cholesterol | 0.676 | -0.44 |
| AJ | 0.165 | -0.081 |
| Bibs02 | -0.272 | -0.162 |
| Bibs02c | 0.024 | -0.142 |
| BL6 | -0.126 | -0.081 |
| BL6a | -0.38 | -1.045 |
| BXD01 | -0.394 | -1.875 |
| BXD010 | -0.011 | -1.722 |
| BXD011 | -0.767 | -1.305 |
| BXD03 | -1.315 | -1.743 |
| BXD04 | -0.241 | -1.927 |
| BXD05 | -0.464 | -0.858 |
| BXD06 | -0.398 | -1.423 |
| BXD07 | -0.233 | -2.32 |
| BXD08 | -0.643 | -0.595 |
| BXD09 | -0.414 | -1.348 |
| CAST | 0.546 | 0.317 |
| CCcont | -0.291 | -1.909 |
| DS01 | -0.298 | -0.979 |
| DS02 | -0.186 | -0.922 |
| DS04 | 0.022 | -0.145 |
| DS0c | 0.006 | -0.94 |
| GP01 | 0.229 | 0.436 |
| GP02 | 0.311 | -1.308 |
| GP0c | -0.463 | -0.058 |
| NOD | 0.853 | -0.358 |
| NZO | 0.616 | 0.377 |
| PWK | 0.871 | 0.114 |
| H37Rv_KO_CtpC | -0.154 | -0.02 |
| H37Rv_KO_CtpD | 0.859 | -0.065 |
| H37Rv_KO_Rv1272 | 0.33 | -1.386 |
| H37Rv_KO_SugABC | 0.099 | 0.15 |
| H37Rv_KO_MbtN | 0.473 | -0.681 |
| Trans05 | -0.115 | -1.305 |
| macrophage_unactivated | -1.367 | -1.944 |
| IL1 | -0.75 | -2.115 |
| Rapamycin | -1.243 | -3.637 |
| Tcell | -1.095 | -1.522 |
| GMCSF | -1.257 | -1.426 |
| IFNab | -0.859 | -2.582 |
| IFNg | -1.392 | -2.138 |
| IFNg_GMCSF1 | -0.05 | -1.335 |
| Rv1432_day32 | 0.336 | -0.014 |
| Rv1565c_day32 | -0.223 | 0.916 |
| secA2_input | 0.861 | -0.833 |
| delta_Rv3594 | -0.795 | -2.145 |
| delta_Rv3717 | -0.774 | -0.545 |
| delta_Rv3811 | -0.259 | -0.568 |
| delta_Rv0954 | -0.84 | -1.344 |
| PonA1 | 0.284 | -0.68 |
| EccD1_KO | -0.135 | -0.355 |
| EspI_KO | -0.197 | 0.433 |
| PE35_KO | -0.228 | -1.811 |
| PPE68_KO | -0.403 | -2.358 |
| glycerol2 | 0.842 | 1.319 |
| lignocerate | 0.351 | 1.128 |
| oleate | 0.588 | -0.457 |
| phosphatidylcholine | 0.403 | 1.297 |
| acetate | -0.313 | 1.215 |
| glucAc | 0.172 | 1.557 |
| Rv0950ko | 1.07 | 1.963 |
| Rv1096ko | 1.505 | 1.215 |
| Rv3684ko | 1.497 | 2.227 |
| delta_otsA_trehalose | -2.118 | -1.723 |