Top 10 genes with highest correlation to Rv0016c/pbpA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0017c/rodA | (cc=0.8416) | info on Rv0017c/rodA |
| Rv0018c/pstP | (cc=0.6591) | info on Rv0018c/pstP |
| Rv3044/fecB | (cc=0.6212) | info on Rv3044/fecB |
| Rv0019c/fhaB | (cc=0.6162) | info on Rv0019c/fhaB |
| Rv0989c/grcC2 | (cc=0.5906) | info on Rv0989c/grcC2 |
| Rv0955/- | (cc=0.5902) | info on Rv0955/- |
| Rv1421/- | (cc=0.5841) | info on Rv1421/- |
| Rv0050/ponA1 | (cc=0.5816) | info on Rv0050/ponA1 |
| Rv1836c/- | (cc=0.578) | info on Rv1836c/- |
| Rv0949/uvrD1 | (cc=0.5777) | info on Rv0949/uvrD1 |
Correlation of Rv0016c/pbpA with Rv0017c/rodA
Normalized LFCs for Rv0016c/pbpA:
(description and provenance of datasets)
| Rv0016c/pbpA | Rv0017c/rodA | |
| Fe_supp_jason_reseq | 0.98 | 2.392 |
| low_pH_jason_reseq | -0.192 | 2.923 |
| NO_jason_reseq | -0.302 | -0.281 |
| B6_jason_reseq | -0.421 | 0.0 |
| MHCII_jason_reseq | 0.0 | 0.503 |
| Isoniazid02 | 0.0 | -1.005 |
| Rifampicin4 | -0.753 | -2.32 |
| Ethambutol3 | -1.837 | -2.802 |
| Meropenem3 | -1.495 | -1.846 |
| Vancomycin16 | -1.653 | -4.6 |
| Rv2680_day32 | -0.429 | 1.168 |
| H37Rv_KO_MarP | -3.2 | -4.322 |
| hypoxia_3wks | 0.638 | 0.447 |
| hypoxia_6wks | 1.161 | 0.656 |
| glycerol | 1.549 | 1.891 |
| cholesterol | 0.773 | 1.357 |
| AJ | -0.212 | -0.866 |
| Bibs02 | 1.686 | 1.507 |
| Bibs02c | 0.174 | 0.488 |
| BL6 | 0.731 | 0.805 |
| BL6a | 0.462 | 0.769 |
| BXD01 | 0.626 | 1.247 |
| BXD010 | 0.299 | -0.141 |
| BXD011 | 0.0 | 0.54 |
| BXD03 | 0.0 | 0.424 |
| BXD04 | 0.524 | 0.236 |
| BXD05 | 0.915 | 0.903 |
| BXD06 | 0.401 | 0.254 |
| BXD07 | 0.416 | 0.323 |
| BXD08 | 0.639 | 0.653 |
| BXD09 | 0.226 | 0.14 |
| CAST | 0.37 | -0.39 |
| CCcont | 1.206 | 2.042 |
| DS01 | 0.197 | 0.83 |
| DS02 | 0.35 | -0.117 |
| DS04 | 0.707 | 0.822 |
| DS0c | 0.0 | 0.217 |
| GP01 | 0.979 | 1.006 |
| GP02 | 0.194 | -0.194 |
| GP0c | 1.289 | 1.008 |
| NOD | 0.0 | -0.524 |
| NZO | -0.38 | -1.246 |
| PWK | -0.374 | -1.225 |
| H37Rv_KO_CtpC | 0.592 | 0.571 |
| H37Rv_KO_CtpD | 1.56 | 1.363 |
| H37Rv_KO_Rv1272 | 0.424 | 0.824 |
| H37Rv_KO_SugABC | 0.627 | 0.453 |
| H37Rv_KO_MbtN | 0.376 | 0.943 |
| Trans05 | 0.0 | 0.642 |
| macrophage_unactivated | 0.246 | 0.385 |
| IL1 | 0.231 | -0.679 |
| Rapamycin | -0.807 | -1.363 |
| Tcell | 0.0 | 0.398 |
| GMCSF | -0.449 | -1.658 |
| IFNab | 0.236 | -0.13 |
| IFNg | 0.0 | -1.344 |
| IFNg_GMCSF1 | 0.698 | 0.258 |
| Rv1432_day32 | 0.763 | 2.066 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | -1.061 | -2.537 |
| delta_Rv3594 | 0.639 | 0.737 |
| delta_Rv3717 | -0.179 | 0.369 |
| delta_Rv3811 | 0.666 | 1.068 |
| delta_Rv0954 | -3.542 | -2.989 |
| PonA1 | -2.49 | -2.28 |
| EccD1_KO | -0.977 | -0.921 |
| EspI_KO | -1.346 | -0.847 |
| PE35_KO | 1.187 | 0.505 |
| PPE68_KO | 0.41 | 0.349 |
| glycerol2 | -2.276 | -3.464 |
| lignocerate | -1.707 | -1.587 |
| oleate | -1.988 | -3.311 |
| phosphatidylcholine | -2.274 | -1.737 |
| acetate | -0.756 | -0.504 |
| glucAc | -0.585 | -0.083 |
| Rv0950ko | -2.023 | -1.716 |
| Rv1096ko | -1.867 | -1.007 |
| Rv3684ko | 0.714 | 0.488 |
| delta_otsA_trehalose | 0.478 | 1.148 |