from: <A HREF='https://pubmed.ncbi.nlm.nih.gov/15247240/'>Boshoff et al (2004). The transcriptional responses of Mycobacterium tuberculosis to inhibitors of metabolism. J Biol Chem.</A>

<H3>Gene Expression Profile for Rv3409c/choD</H3>
<table border=1>
<TD>LFC<TD>treatment<TD>description<TD>class of inhibitor<TR>
<TD><p style="background-color:rgb(255,165,165);">-1.407</p><TD>Amikacin<TD>ug/mL Amikacin<TD>translation<TR>
<TD><p style="background-color:rgb(255,197,197);">-0.908</p><TD>Cap<TD>5-10ug/mL Capreomycin<TD>translation<TR>
<TD><p style="background-color:rgb(255,178,178);">-1.218</p><TD>Rox<TD>10-50 ug/mL Roxithromycin<TD>translation<TR>
<TD><p style="background-color:rgb(228,228,255);">0.437</p><TD>SM<TD>2-5 ug/mL Streptomycin<TD>translation<TR>
<TD><p style="background-color:rgb(128,128,255);">1.994</p><TD>Tet<TD>5-10 ug/mL Tetracycline<TD>translation<TR>
<TD><p style="background-color:rgb(184,184,255);">1.111</p><TD>Rif<TD>0.2-5ug/mL Rifampicin<TD>transcription<TR>
<TD><p style="background-color:rgb(213,213,255);">0.661</p><TD>Rifp<TD>0.1-0.5ug/mL Rifapentine<TD>transcription<TR>
<TD><p style="background-color:rgb(227,227,255);">0.441</p><TD>Min_med__succinate_<TD>Minimal medium with succinate as sole carbon source as compared to growth in 7H9/ADC/Tween/glycerol<TD>starvation<TR>
<TD><p style="background-color:rgb(209,209,255);">0.731</p><TD>CCCP<TD>10-50 uM Carbonyl cyanide 3-chlorophenylhydrazone<TD>respiration<TR>
<TD><p style="background-color:rgb(255,236,236);">-0.312</p><TD>CPZ<TD>10-50 ug/mL Chlorpromazine<TD>respiration<TR>
<TD><p style="background-color:rgb(255,231,231);">-0.384</p><TD>Clofazimine<TD>10-13 ug/mL Clofazimine<TD>respiration<TR>
<TD><p style="background-color:rgb(221,221,255);">0.534</p><TD>Clotrimazole<TD>10-24 ug/mL Clotrimazole (azole drug)<TD>respiration<TR>
<TD><p style="background-color:rgb(86,86,255);">2.642</p><TD>DCCD<TD>20-100 uM Dicyclohexylcarbodiimide<TD>respiration<TR>
<TD><p style="background-color:rgb(180,180,255);">1.186</p><TD>DNP<TD>"0.5-2.5 mM 2,4-Dinitrophenol"<TD>respiration<TR>
<TD><p style="background-color:rgb(242,242,255);">0.216</p><TD>DTT<TD>"1-2 mM 1,4-Dithio-DL-threitol"<TD>respiration<TR>
<TD><p style="background-color:rgb(255,246,246);">-0.153</p><TD>Econazole<TD>10-24 ug/mL Econazole (azole drug)<TD>respiration<TR>
<TD><p style="background-color:rgb(255,231,231);">-0.377</p><TD>GSNO_CFZ<TD>0.1 mM S-Nitrosoglutathione + 5 ug/mL Clofazimine<TD>respiration<TR>
<TD><p style="background-color:rgb(255,201,201);">-0.856</p><TD>GSNO_CPZ<TD>0.1 mM S-Nitrosoglutathione + 20-25 ug/mL Chlorpromazine<TD>respiration<TR>
<TD><p style="background-color:rgb(255,243,243);">-0.195</p><TD>GSNO_KCN<TD>0.1mM S-Nitrosoglutathione + 5ug/mL potassium cyanide<TD>respiration<TR>
<TD><p style="background-color:rgb(255,156,156);">-1.559</p><TD>GSNO_menadione<TD>0.1 mM S-Nitrosoglutathione + 6-10 ug/mL menadione<TD>respiration<TR>
<TD><p style="background-color:rgb(130,130,255);">1.967</p><TD>KCN<TD>5-20 ug/mL Potassium cyanide<TD>respiration<TR>
<TD><p style="background-color:rgb(170,170,255);">1.331</p><TD>NaN3<TD>0.2-2 mM Sodium azide<TD>respiration<TR>
<TD><p style="background-color:rgb(246,246,255);">0.147</p><TD>Nigericin<TD>50 uM Nigericin<TD>respiration<TR>
<TD><p style="background-color:rgb(222,222,255);">0.522</p><TD>TRC<TD>10-150 ug/mL Triclosan<TD>respiration<TR>
<TD><p style="background-color:rgb(255,193,193);">-0.983</p><TD>TRZ<TD>10-25 ug/mL Thioridazine<TD>respiration<TR>
<TD><p style="background-color:rgb(255,145,145);">-1.719</p><TD>Valinomycin<TD>0.5-10 uM Valinomycin<TD>respiration<TR>
<TD><p style="background-color:rgb(255,255,255);">0.000</p><TD>ZnSO4<TD>2 mM ZnSO4<TD>respiration<TR>
<TD><p style="background-color:rgb(255,232,232);">-0.370</p><TD>menadione<TD>6-10 ug/mL Menadione<TD>respiration<TR>
<TD><p style="background-color:rgb(249,249,255);">0.099</p><TD>Ascididemin_Nat_prod<TD>4-9 ug/mL Organic extract of Eudistoma amplum<TD>ironLimitation<TR>
<TD><p style="background-color:rgb(255,237,237);">-0.283</p><TD>Deferoxamine<TD>150-250 uM Deferoxamine mesylate<TD>ironLimitation<TR>
<TD><p style="background-color:rgb(255,254,254);">-0.023</p><TD>Dipyridyl<TD>"100-200 uM 2,2'-Bipyridyl"<TD>ironLimitation<TR>
<TD><p style="background-color:rgb(245,245,255);">0.169</p><TD>GSNO<TD>0.02-0.1mM S-Nitrosoglutathione<TD>dosRassociated<TR>
<TD><p style="background-color:rgb(255,229,229);">-0.409</p><TD>NRP_1<TD>Non-replicating persistence stage 1<TD>dosRassociated<TR>
<TD><p style="background-color:rgb(255,248,248);">-0.123</p><TD>Amp<TD>0.2mg/mL Ampicillin<TD>cellWall<TR>
<TD><p style="background-color:rgb(255,255,255);">-0.001</p><TD>Cephalexin<TD>20-100 ug/mL Cephalexin<TD>cellWall<TR>
<TD><p style="background-color:rgb(255,226,226);">-0.459</p><TD>Cerulenin<TD>0.32-5 ug/mL Cerulenin<TD>cellWall<TR>
<TD><p style="background-color:rgb(255,229,229);">-0.417</p><TD>DIPED<TD>5-100 ug/mL Diisopropylethylenediamine<TD>cellWall<TR>
<TD><p style="background-color:rgb(249,249,255);">0.106</p><TD>EMB<TD>10-20 ug/mL Ethambutol<TD>cellWall<TR>
<TD><p style="background-color:rgb(255,249,249);">-0.097</p><TD>Eta<TD>12-40 ug/mL Ethionamide<TD>cellWall<TR>
<TD><p style="background-color:rgb(255,247,247);">-0.135</p><TD>INH<TD>0.2-0.4 ug/mL Isoniazid<TD>cellWall<TR>
<TD><p style="background-color:rgb(255,245,245);">-0.160</p><TD>TLM<TD>0.1-0.2 mg/mL Thiolactomycin<TD>cellWall<TR>
<TD><p style="background-color:rgb(235,235,255);">0.327</p><TD>Palmitate<TD>Minimal medium with palmitate as sole C-source as compared to minimal medium with glucose as sole Csource<TD>carbonSource<TR>
<TD><p style="background-color:rgb(250,250,255);">0.090</p><TD>Succinate<TD>Minimal medium with succinate as sole C-source as compared to minimal medium with glucose as sole Csource<TD>carbonSource<TR>
<TD><p style="background-color:rgb(247,247,255);">0.132</p><TD>BZA<TD>0.12 mg/mL Benzamide<TD>aromaticAmides<TR>
<TD><p style="background-color:rgb(255,230,230);">-0.401</p><TD>Nam<TD>0.12 - 1.2 mg/mL Nicotinamide<TD>aromaticAmides<TR>
<TD><p style="background-color:rgb(255,247,247);">-0.129</p><TD>PZA<TD>0.12-1.2 mg/mL Pyrazinamide<TD>aromaticAmides<TR>
<TD><p style="background-color:rgb(234,234,255);">0.341</p><TD>H2O2<TD>4 mM hydrogen peroxide<TD>DNAdamaging<TR>
<TD><p style="background-color:rgb(255,242,242);">-0.214</p><TD>Levo<TD>10 ug/mL Levofloxacin<TD>DNAdamaging<TR>
<TD><p style="background-color:rgb(255,246,246);">-0.156</p><TD>Mtm<TD>0.1-0.2 ug/mL Mitomycin C<TD>DNAdamaging<TR>
<TD><p style="background-color:rgb(227,227,255);">0.444</p><TD>Novobiocin<TD>10 ug/mL Novobiocin<TD>DNAdamaging<TR>
<TD><p style="background-color:rgb(245,245,255);">0.163</p><TD>Oflox<TD>5-10 ug/mL Ofloxacin<TD>DNAdamaging<TR>
<TD><p style="background-color:rgb(255,215,215);">-0.634</p><TD>UV<TD>UV-irradiation<TD>DNAdamaging<TR>
<TD><p style="background-color:rgb(255,247,247);">-0.133</p><TD>ARP4<TD>1-4 ug/mL Antitubercular compound ARP4<TD>?<TR>
<TD><p style="background-color:rgb(255,239,239);">-0.257</p><TD>Antimycin<TD>12.5-50 ug/mL Antimycin A<TD>?<TR>
<TD><p style="background-color:rgb(255,227,227);">-0.453</p><TD>DTNB<TD>"1-2 mM 5,5'-Dithiobis(2-nitrobenzoic acid)"<TD>?<TR>
<TD><p style="background-color:rgb(255,246,246);">-0.156</p><TD>PA_1<TD>10-50 ug/mL Antitubercular compound PA-1<TD>?<TR>
<TD><p style="background-color:rgb(250,250,255);">0.087</p><TD>PA_21<TD>10-50 ug/mL Antitubercular compound PA-21<TD>?<TR>
<TD><p style="background-color:rgb(98,98,255);">2.459</p><TD>PA824<TD>0.2-2 ug/mL PA-824<TD>?<TR>
<TD><p style="background-color:rgb(180,180,255);">1.183</p><TD>Procept_6776<TD>20-30 ug/mL Antitubercular compound Procept 6776<TD>?<TR>
<TD><p style="background-color:rgb(209,209,255);">0.729</p><TD>Procept_6778<TD>5-40 ug/mL Antitubercular compound Procept 6778<TD>?<TR>
<TD><p style="background-color:rgb(255,169,169);">-1.345</p><TD>Verapamil<TD>50 uM Verapamil<TD>?<TR>
<TD><p style="background-color:rgb(255,183,183);">-1.130</p><TD>mercaptoethanol<TD>2 mM 2-Mercaptoethanol<TD>?<TR>
<TD><p style="background-color:rgb(240,240,255);">0.243</p><TD>methoxatin<TD>10-20 ug/mL Methoxatin<TD>?<TR>
</table>