from: Boshoff et al (2004). The transcriptional responses of Mycobacterium tuberculosis to inhibitors of metabolism. J Biol Chem.

Gene Expression Profile for Rv3404c/-

LFCtreatmentdescriptionclass of inhibitor

-1.493

Amikacinug/mL Amikacintranslation

1.106

Cap5-10ug/mL Capreomycintranslation

-0.344

Rox10-50 ug/mL Roxithromycintranslation

0.428

SM2-5 ug/mL Streptomycintranslation

-1.532

Tet5-10 ug/mL Tetracyclinetranslation

-0.185

Rif0.2-5ug/mL Rifampicintranscription

0.231

Rifp0.1-0.5ug/mL Rifapentinetranscription

1.085

Min_med__succinate_Minimal medium with succinate as sole carbon source as compared to growth in 7H9/ADC/Tween/glycerolstarvation

-1.474

CCCP10-50 uM Carbonyl cyanide 3-chlorophenylhydrazonerespiration

-0.902

CPZ10-50 ug/mL Chlorpromazinerespiration

0.349

Clofazimine10-13 ug/mL Clofaziminerespiration

0.157

Clotrimazole10-24 ug/mL Clotrimazole (azole drug)respiration

-1.521

DCCD20-100 uM Dicyclohexylcarbodiimiderespiration

-0.669

DNP"0.5-2.5 mM 2,4-Dinitrophenol"respiration

-0.227

DTT"1-2 mM 1,4-Dithio-DL-threitol"respiration

0.120

Econazole10-24 ug/mL Econazole (azole drug)respiration

-0.541

GSNO_CFZ0.1 mM S-Nitrosoglutathione + 5 ug/mL Clofaziminerespiration

-1.002

GSNO_CPZ0.1 mM S-Nitrosoglutathione + 20-25 ug/mL Chlorpromazinerespiration

0.281

GSNO_KCN0.1mM S-Nitrosoglutathione + 5ug/mL potassium cyaniderespiration

-0.281

GSNO_menadione0.1 mM S-Nitrosoglutathione + 6-10 ug/mL menadionerespiration

-0.337

KCN5-20 ug/mL Potassium cyaniderespiration

-0.240

NaN30.2-2 mM Sodium aziderespiration

0.718

Nigericin50 uM Nigericinrespiration

-0.699

TRC10-150 ug/mL Triclosanrespiration

-0.906

TRZ10-25 ug/mL Thioridazinerespiration

-1.626

Valinomycin0.5-10 uM Valinomycinrespiration

0.544

ZnSO42 mM ZnSO4respiration

0.110

menadione6-10 ug/mL Menadionerespiration

0.034

Ascididemin_Nat_prod4-9 ug/mL Organic extract of Eudistoma amplumironLimitation

0.558

Deferoxamine150-250 uM Deferoxamine mesylateironLimitation

0.630

Dipyridyl"100-200 uM 2,2'-Bipyridyl"ironLimitation

0.211

GSNO0.02-0.1mM S-NitrosoglutathionedosRassociated

0.439

NRP_1Non-replicating persistence stage 1dosRassociated

0.099

Amp0.2mg/mL AmpicillincellWall

0.395

Cephalexin20-100 ug/mL CephalexincellWall

1.077

Cerulenin0.32-5 ug/mL CerulenincellWall

0.212

DIPED5-100 ug/mL DiisopropylethylenediaminecellWall

0.101

EMB10-20 ug/mL EthambutolcellWall

-0.031

Eta12-40 ug/mL EthionamidecellWall

-0.862

INH0.2-0.4 ug/mL IsoniazidcellWall

0.022

TLM0.1-0.2 mg/mL ThiolactomycincellWall

1.031

PalmitateMinimal medium with palmitate as sole C-source as compared to minimal medium with glucose as sole CsourcecarbonSource

1.556

SuccinateMinimal medium with succinate as sole C-source as compared to minimal medium with glucose as sole CsourcecarbonSource

0.411

BZA0.12 mg/mL BenzamidearomaticAmides

0.350

Nam0.12 - 1.2 mg/mL NicotinamidearomaticAmides

0.191

PZA0.12-1.2 mg/mL PyrazinamidearomaticAmides

1.017

H2O24 mM hydrogen peroxideDNAdamaging

0.416

Levo10 ug/mL LevofloxacinDNAdamaging

0.150

Mtm0.1-0.2 ug/mL Mitomycin CDNAdamaging

1.929

Novobiocin10 ug/mL NovobiocinDNAdamaging

-0.050

Oflox5-10 ug/mL OfloxacinDNAdamaging

0.255

UVUV-irradiationDNAdamaging

1.696

ARP41-4 ug/mL Antitubercular compound ARP4?

0.243

Antimycin12.5-50 ug/mL Antimycin A?

1.345

DTNB"1-2 mM 5,5'-Dithiobis(2-nitrobenzoic acid)"?

0.236

PA_110-50 ug/mL Antitubercular compound PA-1?

0.248

PA_2110-50 ug/mL Antitubercular compound PA-21?

-1.074

PA8240.2-2 ug/mL PA-824?

0.228

Procept_677620-30 ug/mL Antitubercular compound Procept 6776?

0.112

Procept_67785-40 ug/mL Antitubercular compound Procept 6778?

0.130

Verapamil50 uM Verapamil?

-0.188

mercaptoethanol2 mM 2-Mercaptoethanol?

0.683

methoxatin10-20 ug/mL Methoxatin?