from: Boshoff et al (2004). The transcriptional responses of Mycobacterium tuberculosis to inhibitors of metabolism. J Biol Chem.

Gene Expression Profile for Rv1298/rpmE

LFCtreatmentdescriptionclass of inhibitor

0.989

Amikacinug/mL Amikacintranslation

1.356

Cap5-10ug/mL Capreomycintranslation

1.284

Rox10-50 ug/mL Roxithromycintranslation

1.162

SM2-5 ug/mL Streptomycintranslation

1.484

Tet5-10 ug/mL Tetracyclinetranslation

-0.751

Rif0.2-5ug/mL Rifampicintranscription

-1.878

Rifp0.1-0.5ug/mL Rifapentinetranscription

0.000

Min_med__succinate_Minimal medium with succinate as sole carbon source as compared to growth in 7H9/ADC/Tween/glycerolstarvation

-1.117

CCCP10-50 uM Carbonyl cyanide 3-chlorophenylhydrazonerespiration

-0.607

CPZ10-50 ug/mL Chlorpromazinerespiration

0.000

Clofazimine10-13 ug/mL Clofaziminerespiration

-0.099

Clotrimazole10-24 ug/mL Clotrimazole (azole drug)respiration

0.000

DCCD20-100 uM Dicyclohexylcarbodiimiderespiration

0.000

DNP"0.5-2.5 mM 2,4-Dinitrophenol"respiration

-2.239

DTT"1-2 mM 1,4-Dithio-DL-threitol"respiration

-0.043

Econazole10-24 ug/mL Econazole (azole drug)respiration

0.453

GSNO_CFZ0.1 mM S-Nitrosoglutathione + 5 ug/mL Clofaziminerespiration

-0.093

GSNO_CPZ0.1 mM S-Nitrosoglutathione + 20-25 ug/mL Chlorpromazinerespiration

0.000

GSNO_KCN0.1mM S-Nitrosoglutathione + 5ug/mL potassium cyaniderespiration

-0.216

GSNO_menadione0.1 mM S-Nitrosoglutathione + 6-10 ug/mL menadionerespiration

0.000

KCN5-20 ug/mL Potassium cyaniderespiration

-1.781

NaN30.2-2 mM Sodium aziderespiration

-0.659

Nigericin50 uM Nigericinrespiration

-0.735

TRC10-150 ug/mL Triclosanrespiration

0.000

TRZ10-25 ug/mL Thioridazinerespiration

-0.858

Valinomycin0.5-10 uM Valinomycinrespiration

0.000

ZnSO42 mM ZnSO4respiration

-0.362

menadione6-10 ug/mL Menadionerespiration

-0.353

Ascididemin_Nat_prod4-9 ug/mL Organic extract of Eudistoma amplumironLimitation

-0.105

Deferoxamine150-250 uM Deferoxamine mesylateironLimitation

0.357

Dipyridyl"100-200 uM 2,2'-Bipyridyl"ironLimitation

-0.324

GSNO0.02-0.1mM S-NitrosoglutathionedosRassociated

-0.751

NRP_1Non-replicating persistence stage 1dosRassociated

0.249

Amp0.2mg/mL AmpicillincellWall

-0.004

Cephalexin20-100 ug/mL CephalexincellWall

-0.001

Cerulenin0.32-5 ug/mL CerulenincellWall

-0.227

DIPED5-100 ug/mL DiisopropylethylenediaminecellWall

-0.252

EMB10-20 ug/mL EthambutolcellWall

-0.092

Eta12-40 ug/mL EthionamidecellWall

-0.034

INH0.2-0.4 ug/mL IsoniazidcellWall

-0.066

TLM0.1-0.2 mg/mL ThiolactomycincellWall

0.000

PalmitateMinimal medium with palmitate as sole C-source as compared to minimal medium with glucose as sole CsourcecarbonSource

0.000

SuccinateMinimal medium with succinate as sole C-source as compared to minimal medium with glucose as sole CsourcecarbonSource

-0.117

BZA0.12 mg/mL BenzamidearomaticAmides

-0.018

Nam0.12 - 1.2 mg/mL NicotinamidearomaticAmides

0.764

PZA0.12-1.2 mg/mL PyrazinamidearomaticAmides

-0.431

H2O24 mM hydrogen peroxideDNAdamaging

0.170

Levo10 ug/mL LevofloxacinDNAdamaging

0.686

Mtm0.1-0.2 ug/mL Mitomycin CDNAdamaging

0.000

Novobiocin10 ug/mL NovobiocinDNAdamaging

0.150

Oflox5-10 ug/mL OfloxacinDNAdamaging

0.509

UVUV-irradiationDNAdamaging

0.000

ARP41-4 ug/mL Antitubercular compound ARP4?

-0.343

Antimycin12.5-50 ug/mL Antimycin A?

0.203

DTNB"1-2 mM 5,5'-Dithiobis(2-nitrobenzoic acid)"?

-0.301

PA_110-50 ug/mL Antitubercular compound PA-1?

-0.638

PA_2110-50 ug/mL Antitubercular compound PA-21?

-1.696

PA8240.2-2 ug/mL PA-824?

-0.698

Procept_677620-30 ug/mL Antitubercular compound Procept 6776?

0.074

Procept_67785-40 ug/mL Antitubercular compound Procept 6778?

-1.339

Verapamil50 uM Verapamil?

-0.208

mercaptoethanol2 mM 2-Mercaptoethanol?

0.448

methoxatin10-20 ug/mL Methoxatin?