from: Boshoff et al (2004). The transcriptional responses of Mycobacterium tuberculosis to inhibitors of metabolism. J Biol Chem.

Gene Expression Profile for Rv0609/vapC28

LFCtreatmentdescriptionclass of inhibitor

2.426

Amikacinug/mL Amikacintranslation

2.225

Cap5-10ug/mL Capreomycintranslation

3.445

Rox10-50 ug/mL Roxithromycintranslation

0.846

SM2-5 ug/mL Streptomycintranslation

3.643

Tet5-10 ug/mL Tetracyclinetranslation

0.328

Rif0.2-5ug/mL Rifampicintranscription

-0.053

Rifp0.1-0.5ug/mL Rifapentinetranscription

0.000

Min_med__succinate_Minimal medium with succinate as sole carbon source as compared to growth in 7H9/ADC/Tween/glycerolstarvation

-1.099

CCCP10-50 uM Carbonyl cyanide 3-chlorophenylhydrazonerespiration

-0.162

CPZ10-50 ug/mL Chlorpromazinerespiration

0.000

Clofazimine10-13 ug/mL Clofaziminerespiration

-0.465

Clotrimazole10-24 ug/mL Clotrimazole (azole drug)respiration

0.000

DCCD20-100 uM Dicyclohexylcarbodiimiderespiration

0.000

DNP"0.5-2.5 mM 2,4-Dinitrophenol"respiration

0.000

DTT"1-2 mM 1,4-Dithio-DL-threitol"respiration

-0.262

Econazole10-24 ug/mL Econazole (azole drug)respiration

0.000

GSNO_CFZ0.1 mM S-Nitrosoglutathione + 5 ug/mL Clofaziminerespiration

-0.499

GSNO_CPZ0.1 mM S-Nitrosoglutathione + 20-25 ug/mL Chlorpromazinerespiration

-2.785

GSNO_KCN0.1mM S-Nitrosoglutathione + 5ug/mL potassium cyaniderespiration

0.118

GSNO_menadione0.1 mM S-Nitrosoglutathione + 6-10 ug/mL menadionerespiration

0.000

KCN5-20 ug/mL Potassium cyaniderespiration

0.000

NaN30.2-2 mM Sodium aziderespiration

-0.846

Nigericin50 uM Nigericinrespiration

-0.208

TRC10-150 ug/mL Triclosanrespiration

0.000

TRZ10-25 ug/mL Thioridazinerespiration

-0.498

Valinomycin0.5-10 uM Valinomycinrespiration

0.000

ZnSO42 mM ZnSO4respiration

0.361

menadione6-10 ug/mL Menadionerespiration

-0.301

Ascididemin_Nat_prod4-9 ug/mL Organic extract of Eudistoma amplumironLimitation

-0.462

Deferoxamine150-250 uM Deferoxamine mesylateironLimitation

-0.243

Dipyridyl"100-200 uM 2,2'-Bipyridyl"ironLimitation

1.594

GSNO0.02-0.1mM S-NitrosoglutathionedosRassociated

1.741

NRP_1Non-replicating persistence stage 1dosRassociated

-0.424

Amp0.2mg/mL AmpicillincellWall

-0.146

Cephalexin20-100 ug/mL CephalexincellWall

-0.388

Cerulenin0.32-5 ug/mL CerulenincellWall

0.722

DIPED5-100 ug/mL DiisopropylethylenediaminecellWall

0.057

EMB10-20 ug/mL EthambutolcellWall

-0.171

Eta12-40 ug/mL EthionamidecellWall

-0.074

INH0.2-0.4 ug/mL IsoniazidcellWall

-0.442

TLM0.1-0.2 mg/mL ThiolactomycincellWall

0.000

PalmitateMinimal medium with palmitate as sole C-source as compared to minimal medium with glucose as sole CsourcecarbonSource

0.000

SuccinateMinimal medium with succinate as sole C-source as compared to minimal medium with glucose as sole CsourcecarbonSource

-0.606

BZA0.12 mg/mL BenzamidearomaticAmides

-0.450

Nam0.12 - 1.2 mg/mL NicotinamidearomaticAmides

-0.315

PZA0.12-1.2 mg/mL PyrazinamidearomaticAmides

-0.711

H2O24 mM hydrogen peroxideDNAdamaging

1.056

Levo10 ug/mL LevofloxacinDNAdamaging

-0.746

Mtm0.1-0.2 ug/mL Mitomycin CDNAdamaging

0.000

Novobiocin10 ug/mL NovobiocinDNAdamaging

1.171

Oflox5-10 ug/mL OfloxacinDNAdamaging

-0.340

UVUV-irradiationDNAdamaging

0.000

ARP41-4 ug/mL Antitubercular compound ARP4?

-0.239

Antimycin12.5-50 ug/mL Antimycin A?

0.747

DTNB"1-2 mM 5,5'-Dithiobis(2-nitrobenzoic acid)"?

0.828

PA_110-50 ug/mL Antitubercular compound PA-1?

0.385

PA_2110-50 ug/mL Antitubercular compound PA-21?

-0.068

PA8240.2-2 ug/mL PA-824?

1.382

Procept_677620-30 ug/mL Antitubercular compound Procept 6776?

-0.080

Procept_67785-40 ug/mL Antitubercular compound Procept 6778?

-0.591

Verapamil50 uM Verapamil?

0.546

mercaptoethanol2 mM 2-Mercaptoethanol?

0.876

methoxatin10-20 ug/mL Methoxatin?