TB Genome Annotation Portal

Rv0602c (tcrA)

Amino Acid Sequence

VADETTMRAGRGPGRACGRVSGVRILVVEDEPKMTALLARALTEEGHTVDTVADGRHAVAAVDGGDYDAVVLDVMLPGIDGFEVCARLRRQRVWTPVLML
TARGAVTDRIAGLDGGADDYLTKPFNLDELFARLRALSRRGPIPRPPTLEAGDLRLDPSEHRVWRADTEIRLSHKEFTLLEALIRRPGIVHTRAQLLERC
WDAAYEARSNIVDVYIRYLRDKIDRPFGVTSLETIRGAGYRLRKDGGRHALPR
(Nucleotide sequence available on KEGG)

Additional Information



ESSENTIALITY

MtbTnDB - interactive tool for exploring a database of published TnSeq datasets for Mtb

TnSeqCorr - genes with correlated TnSeq profiles across >100 conditions *new*

Classification Condition Strain Method Reference Notes
Non-Essential Sodium Oleate H37RvMA Gumbel Subhalaxmi Nambi Probability of Essentiality: 0.000000;
2 non-insertions in a row out of 11 sites
Non-Essential Lignoceric Acid H37RvMA Gumbel Subhalaxmi Nambi Probability of Essentiality: 0.000000;
1 non-insertions in a row out of 11 sites
Non-Essential Phosphatidylcholine H37RvMA Gumbel Subhalaxmi Nambi Probability of Essentiality: 0.000000;
1 non-insertions in a row out of 11 sites
Non-Essential minimal media + 0.1% glycerol H37RvMA Gumbel Griffin et al. (2011) Probability of Essentiality: 0.000000;
1 non-insertions in a row out of 11 sites
Non-Essential minimal media + 0.01% cholesterol H37RvMA Gumbel Griffin et al. (2011) Probability of Essentiality: 0.000000;
1 non-insertions in a row out of 11 sites
Non-Essential 7H10-glycerol H37RvMA TraSH Sassetti et al. (2003a)
Non-Essential C57BL/6J mice (8 weeks) H37RvMA TraSH Sassetti et al. (2003b) Hybridization Ratio: 0.62
Non-Essential 7H09/7H10 + rich media H37RvMA MotifHMM DeJesus et al. (2017) Fully saturated (14 reps).

TnSeq Data No data currently available.
  • No TnSeq data currently available for this Target.
RNASeq Data No data currently available.
  • No RNA-Seq data currently available for this Target.
Metabolomic Profiles No data currently available.
  • No Metabolomic data currently available for this Target.
Proteomic Data No data currently available.
  • No Proteomic data currently available for this Target.

Regulatory Relationships from Systems Biology
  • BioCyc

    Gene interactions based on ChIPSeq and Transcription Factor Over-Expression (TFOE) (Systems Biology)

    NOTE: Green edges represent the connected genes being classified as differentially essential as a result of the middle gene being knocked out. These interactions are inferred based on RNASeq.

    Interactions based on ChIPSeq data

  • Interactions based on ChIPSeq data (Minch et al. 2014)

    Interactions based on TFOE data (Rustad et al. 2014)



    TBCAP

    Tubculosis Community Annotation Project (
    Slayden et al., 2013)

    Rv0602c (tcrA)

    PropertyValueCreatorEvidencePMIDComment
    InteractionRegulatory Rv0601cshahanup86IDAStructural Analysis
    M. Bhattacharya,A. Biswas,AK. Das Interaction analysis of TcrX/Y two component system from Mycobacterium tuberculosis. Biochimie 2010
    InteractionRegulatory Rv0601cshahanup86IDAStructural Analysis
    R. Shrivastava & AK. Das Temperature and urea induced conformational changes of the histidine kinases from Mycobacterium tuberculosis. Int. J. Biol. Macromol. 2007
    CitationFunctional insights from the molecular modelling of a novel two-component system. R. Shrivastava, DR. Das et al. Biochem. Biophys. Res. Commun. 2006shahanup86IDA16650822Structural Analysis
    InteractionRegulatory Rv0600cshahanup86IDAStructural Analysis
    R. Shrivastava, DR. Das et al. Functional insights from the molecular modelling of a novel two-component system. Biochem. Biophys. Res. Commun. 2006
    InteractionRegulatory Rv0601cshahanup86IDAStructural Analysis
    R. Shrivastava, DR. Das et al. Functional insights from the molecular modelling of a novel two-component system. Biochem. Biophys. Res. Commun. 2006
    CitationIntra- and intermolecular domain interactions among novel two-component system proteins coded by Rv0600c, Rv0601c and Rv0602c of Mycobacterium tuberculosis. R. Shrivastava, AK. Ghosh et al. Microbiology (Reading, Engl.) 2009shahanup86IDA19246748Structural Analysis
    InteractionRegulatory Rv0600cshahanup86IDAStructural Analysis
    R. Shrivastava, AK. Ghosh et al. Intra- and intermolecular domain interactions among novel two-component system proteins coded by Rv0600c, Rv0601c and Rv0602c of Mycobacterium tuberculosis. Microbiology (Reading, Engl.) 2009
    InteractionRegulatory Rv0601cshahanup86IDAStructural Analysis
    R. Shrivastava, AK. Ghosh et al. Intra- and intermolecular domain interactions among novel two-component system proteins coded by Rv0600c, Rv0601c and Rv0602c of Mycobacterium tuberculosis. Microbiology (Reading, Engl.) 2009
    CitationInteraction analysis of TcrX/Y two component system from Mycobacterium tuberculosis. M. Bhattacharya,A. Biswas,AK. Das Biochimie 2010shahanup86IDA19962420Structural Analysis
    InteractionRegulatory Rv0600cshahanup86IDAStructural Analysis
    M. Bhattacharya,A. Biswas,AK. Das Interaction analysis of TcrX/Y two component system from Mycobacterium tuberculosis. Biochimie 2010
    InteractionRegulatory Rv0601cshahanup86IDASpectrophotometric
    R. Shrivastava, AK. Ghosh et al. Intra- and intermolecular domain interactions among novel two-component system proteins coded by Rv0600c, Rv0601c and Rv0602c of Mycobacterium tuberculosis. Microbiology (Reading, Engl.) 2009
    CitationInteraction analysis of TcrX/Y two component system from Mycobacterium tuberculosis. M. Bhattacharya,A. Biswas,AK. Das Biochimie 2010shahanup86IDA19962420Spectrophotometric
    InteractionRegulatory Rv0600cshahanup86IDASpectrophotometric
    M. Bhattacharya,A. Biswas,AK. Das Interaction analysis of TcrX/Y two component system from Mycobacterium tuberculosis. Biochimie 2010
    InteractionRegulatory Rv0601cshahanup86IDASpectrophotometric
    M. Bhattacharya,A. Biswas,AK. Das Interaction analysis of TcrX/Y two component system from Mycobacterium tuberculosis. Biochimie 2010
    CitationProbing the nucleotide binding and phosphorylation by the histidine kinase of a novel three-protein two-component system from Mycobacterium tuberculosis. R. Shrivastava, AK. Ghosh et al. FEBS Lett. 2007shahanup86IDA17434492Structural Analysis
    InteractionRegulatory Rv0600cshahanup86IDAStructural Analysis
    R. Shrivastava, AK. Ghosh et al. Probing the nucleotide binding and phosphorylation by the histidine kinase of a novel three-protein two-component system from Mycobacterium tuberculosis. FEBS Lett. 2007
    InteractionRegulatory Rv0601cshahanup86IDAStructural Analysis
    R. Shrivastava, AK. Ghosh et al. Probing the nucleotide binding and phosphorylation by the histidine kinase of a novel three-protein two-component system from Mycobacterium tuberculosis. FEBS Lett. 2007
    CitationTemperature and urea induced conformational changes of the histidine kinases from Mycobacterium tuberculosis. R. Shrivastava & AK. Das Int. J. Biol. Macromol. 2007shahanup86IDA17335892Structural Analysis
    InteractionRegulatory Rv0600cshahanup86IDAStructural Analysis
    R. Shrivastava & AK. Das Temperature and urea induced conformational changes of the histidine kinases from Mycobacterium tuberculosis. Int. J. Biol. Macromol. 2007
    CitationTemperature and urea induced conformational changes of the histidine kinases from Mycobacterium tuberculosis. R. Shrivastava & AK. Das Int. J. Biol. Macromol. 2007shahanup86IDA17335892Spectrophotometric
    InteractionRegulatory Rv0600cshahanup86IDASpectrophotometric
    R. Shrivastava & AK. Das Temperature and urea induced conformational changes of the histidine kinases from Mycobacterium tuberculosis. Int. J. Biol. Macromol. 2007
    InteractionRegulatory Rv0601cshahanup86IDASpectrophotometric
    R. Shrivastava & AK. Das Temperature and urea induced conformational changes of the histidine kinases from Mycobacterium tuberculosis. Int. J. Biol. Macromol. 2007
    CitationFunctional insights from the molecular modelling of a novel two-component system. R. Shrivastava, DR. Das et al. Biochem. Biophys. Res. Commun. 2006shahanup86IDA16650822Spectrophotometric
    InteractionRegulatory Rv0600cshahanup86IDASpectrophotometric
    R. Shrivastava, DR. Das et al. Functional insights from the molecular modelling of a novel two-component system. Biochem. Biophys. Res. Commun. 2006
    InteractionRegulatory Rv0601cshahanup86IDASpectrophotometric
    R. Shrivastava, DR. Das et al. Functional insights from the molecular modelling of a novel two-component system. Biochem. Biophys. Res. Commun. 2006
    CitationIntra- and intermolecular domain interactions among novel two-component system proteins coded by Rv0600c, Rv0601c and Rv0602c of Mycobacterium tuberculosis. R. Shrivastava, AK. Ghosh et al. Microbiology (Reading, Engl.) 2009shahanup86IDA19246748Spectrophotometric
    InteractionRegulatory Rv0600cshahanup86IDASpectrophotometric
    R. Shrivastava, AK. Ghosh et al. Intra- and intermolecular domain interactions among novel two-component system proteins coded by Rv0600c, Rv0601c and Rv0602c of Mycobacterium tuberculosis. Microbiology (Reading, Engl.) 2009
    InteractionRegulatory Rv0601cshahanup86IDAStructural Analysis
    R. Shrivastava, AK. Ghosh et al. Intra- and intermolecular domain interactions among novel two-component system proteins coded by Rv0600c, Rv0601c and Rv0602c of Mycobacterium tuberculosis. Microbiology (Reading, Engl.) 2009
    InteractionRegulatory Rv0601cshahanup86IDAStructural Analysis
    M. Bhattacharya,A. Biswas,AK. Das Interaction analysis of TcrX/Y two component system from Mycobacterium tuberculosis. Biochimie 2010
    CitationProbing the nucleotide binding and phosphorylation by the histidine kinase of a novel three-protein two-component system from Mycobacterium tuberculosis. R. Shrivastava, AK. Ghosh et al. FEBS Lett. 2007shahanup86IDA17434492Spectrophotometric
    InteractionRegulatory Rv0600cshahanup86IDASpectrophotometric
    R. Shrivastava, AK. Ghosh et al. Probing the nucleotide binding and phosphorylation by the histidine kinase of a novel three-protein two-component system from Mycobacterium tuberculosis. FEBS Lett. 2007
    InteractionRegulatory Rv0601cshahanup86IDASpectrophotometric
    R. Shrivastava, AK. Ghosh et al. Probing the nucleotide binding and phosphorylation by the histidine kinase of a novel three-protein two-component system from Mycobacterium tuberculosis. FEBS Lett. 2007
    InteractionRegulatory Rv0601cshahanup86IDAStructural Analysis
    R. Shrivastava, AK. Ghosh et al. Probing the nucleotide binding and phosphorylation by the histidine kinase of a novel three-protein two-component system from Mycobacterium tuberculosis. FEBS Lett. 2007
    InteractionRegulatory Rv0601cshahanup86IDAStructural Analysis
    R. Shrivastava & AK. Das Temperature and urea induced conformational changes of the histidine kinases from Mycobacterium tuberculosis. Int. J. Biol. Macromol. 2007
    InteractionRegulatory Rv0601cshahanup86IDAStructural Analysis
    R. Shrivastava, DR. Das et al. Functional insights from the molecular modelling of a novel two-component system. Biochem. Biophys. Res. Commun. 2006
    InteractionRegulatory Rv0601cshahanup86IDASpectrophotometric
    R. Shrivastava, DR. Das et al. Functional insights from the molecular modelling of a novel two-component system. Biochem. Biophys. Res. Commun. 2006
    InteractionRegulatory Rv0601cshahanup86IDASpectrophotometric
    R. Shrivastava, AK. Ghosh et al. Intra- and intermolecular domain interactions among novel two-component system proteins coded by Rv0600c, Rv0601c and Rv0602c of Mycobacterium tuberculosis. Microbiology (Reading, Engl.) 2009
    InteractionRegulatory Rv0601cshahanup86IDASpectrophotometric
    M. Bhattacharya,A. Biswas,AK. Das Interaction analysis of TcrX/Y two component system from Mycobacterium tuberculosis. Biochimie 2010
    InteractionRegulatory Rv0600cshahanup86IDAStructural Analysis
    M. Bhattacharya,A. Biswas,AK. Das Interaction analysis of TcrX/Y two component system from Mycobacterium tuberculosis. Biochimie 2010
    InteractionRegulatory Rv0601cshahanup86IDASpectrophotometric
    R. Shrivastava, AK. Ghosh et al. Probing the nucleotide binding and phosphorylation by the histidine kinase of a novel three-protein two-component system from Mycobacterium tuberculosis. FEBS Lett. 2007
    InteractionRegulatory Rv0601cshahanup86IDASpectrophotometric
    R. Shrivastava & AK. Das Temperature and urea induced conformational changes of the histidine kinases from Mycobacterium tuberculosis. Int. J. Biol. Macromol. 2007
    InteractionRegulatory Rv0600cshahanup86IDAStructural Analysis
    R. Shrivastava & AK. Das Temperature and urea induced conformational changes of the histidine kinases from Mycobacterium tuberculosis. Int. J. Biol. Macromol. 2007
    InteractionRegulatory Rv0600cshahanup86IDAStructural Analysis
    R. Shrivastava, DR. Das et al. Functional insights from the molecular modelling of a novel two-component system. Biochem. Biophys. Res. Commun. 2006
    InteractionRegulatory Rv0600cshahanup86IDAStructural Analysis
    R. Shrivastava, AK. Ghosh et al. Intra- and intermolecular domain interactions among novel two-component system proteins coded by Rv0600c, Rv0601c and Rv0602c of Mycobacterium tuberculosis. Microbiology (Reading, Engl.) 2009
    InteractionRegulatory Rv0600cshahanup86IDASpectrophotometric
    R. Shrivastava, AK. Ghosh et al. Intra- and intermolecular domain interactions among novel two-component system proteins coded by Rv0600c, Rv0601c and Rv0602c of Mycobacterium tuberculosis. Microbiology (Reading, Engl.) 2009
    InteractionRegulatory Rv0600cshahanup86IDASpectrophotometric
    M. Bhattacharya,A. Biswas,AK. Das Interaction analysis of TcrX/Y two component system from Mycobacterium tuberculosis. Biochimie 2010
    InteractionRegulatory Rv0600cshahanup86IDAStructural Analysis
    R. Shrivastava, AK. Ghosh et al. Probing the nucleotide binding and phosphorylation by the histidine kinase of a novel three-protein two-component system from Mycobacterium tuberculosis. FEBS Lett. 2007
    InteractionRegulatory Rv0600cshahanup86IDASpectrophotometric
    R. Shrivastava & AK. Das Temperature and urea induced conformational changes of the histidine kinases from Mycobacterium tuberculosis. Int. J. Biol. Macromol. 2007
    InteractionRegulatory Rv0600cshahanup86IDASpectrophotometric
    R. Shrivastava, DR. Das et al. Functional insights from the molecular modelling of a novel two-component system. Biochem. Biophys. Res. Commun. 2006
    InteractionRegulatory Rv0600cshahanup86IDASpectrophotometric
    R. Shrivastava, AK. Ghosh et al. Probing the nucleotide binding and phosphorylation by the histidine kinase of a novel three-protein two-component system from Mycobacterium tuberculosis. FEBS Lett. 2007

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