Top 10 genes with highest correlation to Rv3605c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0136/cyp138 | (cc=0.6273) | info on Rv0136/cyp138 |
| Rv0870c/- | (cc=0.5959) | info on Rv0870c/- |
| Rv0080/- | (cc=0.5763) | info on Rv0080/- |
| Rv0316/- | (cc=0.5732) | info on Rv0316/- |
| Rv2638/- | (cc=0.5636) | info on Rv2638/- |
| Rv0570/nrdZ | (cc=0.5572) | info on Rv0570/nrdZ |
| Rv3445c/esxU | (cc=0.5565) | info on Rv3445c/esxU |
| Rv0964c/- | (cc=0.5554) | info on Rv0964c/- |
| Rv3081/- | (cc=0.5519) | info on Rv3081/- |
| Rv1737c/narK2 | (cc=0.54) | info on Rv1737c/narK2 |
Correlation of Rv3605c/- with Rv0136/cyp138
Normalized LFCs for Rv3605c/-:
(description and provenance of datasets)
| Rv3605c/- | Rv0136/cyp138 | |
| Fe_supp_jason_reseq | -0.088 | -0.399 |
| low_pH_jason_reseq | -0.654 | 0.062 |
| NO_jason_reseq | 0.016 | -0.436 |
| B6_jason_reseq | 0.711 | 1.033 |
| MHCII_jason_reseq | 0.726 | 0.94 |
| Isoniazid02 | -0.122 | -0.674 |
| Rifampicin4 | 0.498 | 0.081 |
| Ethambutol3 | 0.173 | 0.119 |
| Meropenem3 | -0.329 | -0.53 |
| Vancomycin16 | 0.777 | -0.279 |
| Rv2680_day32 | -0.008 | 0.381 |
| H37Rv_KO_MarP | 0.096 | 0.604 |
| hypoxia_3wks | -0.618 | 0.108 |
| hypoxia_6wks | -0.15 | 0.601 |
| glycerol | -0.25 | -1.565 |
| cholesterol | -1.077 | -1.209 |
| AJ | -0.281 | 0.366 |
| Bibs02 | 0.212 | -0.246 |
| Bibs02c | -0.291 | -0.355 |
| BL6 | -0.535 | -0.418 |
| BL6a | -1.472 | -0.73 |
| BXD01 | -1.207 | -0.861 |
| BXD010 | -0.783 | -0.353 |
| BXD011 | -1.413 | -0.795 |
| BXD03 | -0.391 | -0.95 |
| BXD04 | -0.738 | -1.025 |
| BXD05 | -1.6 | -0.967 |
| BXD06 | -0.395 | -0.847 |
| BXD07 | -0.873 | -1.073 |
| BXD08 | -0.574 | -0.598 |
| BXD09 | -0.432 | -0.85 |
| CAST | -0.107 | 0.093 |
| CCcont | -0.83 | -1.132 |
| DS01 | -0.149 | -0.296 |
| DS02 | -0.829 | -0.961 |
| DS04 | 0.537 | -0.386 |
| DS0c | 0.024 | -0.368 |
| GP01 | 0.044 | -1.008 |
| GP02 | 1.157 | 0.164 |
| GP0c | -0.5 | -0.838 |
| NOD | -0.168 | 0.091 |
| NZO | -0.184 | 0.286 |
| PWK | 0.401 | 0.095 |
| H37Rv_KO_CtpC | -0.464 | -0.55 |
| H37Rv_KO_CtpD | 0.558 | -1.034 |
| H37Rv_KO_Rv1272 | -2.501 | -0.984 |
| H37Rv_KO_SugABC | -2.054 | -0.604 |
| H37Rv_KO_MbtN | 0.099 | 0.014 |
| Trans05 | -1.565 | 0.104 |
| macrophage_unactivated | -0.275 | -0.597 |
| IL1 | -0.801 | -1.258 |
| Rapamycin | -0.384 | -0.724 |
| Tcell | -0.31 | -0.929 |
| GMCSF | -1.04 | -0.378 |
| IFNab | 0.085 | -0.432 |
| IFNg | -1.128 | -0.919 |
| IFNg_GMCSF1 | 0.54 | -0.896 |
| Rv1432_day32 | 0.974 | 1.098 |
| Rv1565c_day32 | 1.085 | 0.655 |
| secA2_input | 1.572 | 0.792 |
| delta_Rv3594 | -0.74 | -0.737 |
| delta_Rv3717 | -1.252 | -0.788 |
| delta_Rv3811 | -0.962 | -0.446 |
| delta_Rv0954 | -0.636 | -0.342 |
| PonA1 | 0.564 | -0.11 |
| EccD1_KO | 0.151 | 0.115 |
| EspI_KO | 0.565 | 0.214 |
| PE35_KO | -0.023 | -0.166 |
| PPE68_KO | 0.928 | 0.09 |
| glycerol2 | 0.93 | 1.229 |
| lignocerate | 0.066 | 0.911 |
| oleate | 0.584 | 1.002 |
| phosphatidylcholine | 0.959 | 0.871 |
| acetate | 2.482 | 0.505 |
| glucAc | 1.134 | 0.432 |
| Rv0950ko | 0.455 | 0.268 |
| Rv1096ko | 0.869 | -0.045 |
| Rv3684ko | 0.354 | -0.18 |
| delta_otsA_trehalose | 0.372 | -0.022 |