Top 10 genes with highest correlation to Rv3530c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0999/- | (cc=0.4232) | info on Rv0999/- |
| Rv3775/lipE | (cc=0.4059) | info on Rv3775/lipE |
| Rv3413c/- | (cc=0.3969) | info on Rv3413c/- |
| Rv3810/pirG | (cc=0.3866) | info on Rv3810/pirG |
| Rv2018/- | (cc=0.3809) | info on Rv2018/- |
| Rv2114/- | (cc=0.3751) | info on Rv2114/- |
| Rv1006/- | (cc=0.3737) | info on Rv1006/- |
| Rv3886c/mycP2 | (cc=0.373) | info on Rv3886c/mycP2 |
| Rv1363c/- | (cc=0.3694) | info on Rv1363c/- |
| Rv2170/- | (cc=0.3693) | info on Rv2170/- |
Correlation of Rv3530c/- with Rv0999/-
Normalized LFCs for Rv3530c/-:
(description and provenance of datasets)
| Rv3530c/- | Rv0999/- | |
| Fe_supp_jason_reseq | 0.387 | 1.07 |
| low_pH_jason_reseq | 0.41 | -2.859 |
| NO_jason_reseq | -0.142 | -0.79 |
| B6_jason_reseq | 0.169 | -0.668 |
| MHCII_jason_reseq | 1.45 | -0.177 |
| Isoniazid02 | -0.65 | -1.18 |
| Rifampicin4 | -1.332 | -6.0 |
| Ethambutol3 | 0.095 | -3.222 |
| Meropenem3 | 0.075 | -3.835 |
| Vancomycin16 | -1.244 | -6.0 |
| Rv2680_day32 | -0.778 | -0.811 |
| H37Rv_KO_MarP | -0.047 | -0.865 |
| hypoxia_3wks | 0.112 | 0.056 |
| hypoxia_6wks | 0.282 | -0.307 |
| glycerol | 0.819 | 0.398 |
| cholesterol | 0.93 | 2.859 |
| AJ | 0.55 | -0.871 |
| Bibs02 | -0.476 | 0.925 |
| Bibs02c | -0.497 | -0.083 |
| BL6 | -0.72 | -1.211 |
| BL6a | -0.343 | -1.322 |
| BXD01 | -0.599 | -0.918 |
| BXD010 | -0.777 | -1.239 |
| BXD011 | -0.194 | 1.126 |
| BXD03 | 0.221 | -0.489 |
| BXD04 | -0.874 | -0.673 |
| BXD05 | 0.136 | -0.396 |
| BXD06 | -0.288 | -0.748 |
| BXD07 | -0.128 | -0.58 |
| BXD08 | 0.156 | -0.659 |
| BXD09 | 0.41 | -0.395 |
| CAST | 0.512 | -1.957 |
| CCcont | -0.646 | 0.991 |
| DS01 | 1.042 | -0.546 |
| DS02 | 0.934 | 0.429 |
| DS04 | 1.263 | -0.266 |
| DS0c | 0.773 | -0.396 |
| GP01 | -0.569 | 0.574 |
| GP02 | 0.014 | 1.568 |
| GP0c | 0.619 | 0.445 |
| NOD | -0.584 | -0.975 |
| NZO | 0.527 | -1.608 |
| PWK | 0.624 | -0.602 |
| H37Rv_KO_CtpC | 0.191 | 0.918 |
| H37Rv_KO_CtpD | 1.046 | 1.633 |
| H37Rv_KO_Rv1272 | -0.131 | -0.146 |
| H37Rv_KO_SugABC | 1.254 | 1.311 |
| H37Rv_KO_MbtN | -0.019 | -0.317 |
| Trans05 | -0.752 | -0.733 |
| macrophage_unactivated | 0.079 | 0.458 |
| IL1 | 0.353 | 0.608 |
| Rapamycin | 1.369 | 1.903 |
| Tcell | 0.0 | -1.082 |
| GMCSF | 0.0 | 0.584 |
| IFNab | 0.562 | 1.224 |
| IFNg | 0.992 | 0.051 |
| IFNg_GMCSF1 | 1.731 | 0.845 |
| Rv1432_day32 | -0.332 | -1.785 |
| Rv1565c_day32 | 0.619 | -0.815 |
| secA2_input | -0.399 | -0.437 |
| delta_Rv3594 | 1.031 | 1.088 |
| delta_Rv3717 | -0.279 | 0.487 |
| delta_Rv3811 | 0.617 | 0.77 |
| delta_Rv0954 | 0.786 | 0.674 |
| PonA1 | 0.449 | 0.188 |
| EccD1_KO | -1.029 | -0.789 |
| EspI_KO | -0.696 | 0.1 |
| PE35_KO | -0.111 | 0.137 |
| PPE68_KO | 0.509 | 0.189 |
| glycerol2 | -0.867 | -0.747 |
| lignocerate | -0.312 | -2.208 |
| oleate | -0.604 | -0.855 |
| phosphatidylcholine | -0.661 | -1.288 |
| acetate | -0.426 | -0.497 |
| glucAc | 1.244 | -2.262 |
| Rv0950ko | 0.184 | -1.601 |
| Rv1096ko | 0.887 | -0.989 |
| Rv3684ko | 0.102 | -1.189 |
| delta_otsA_trehalose | -0.897 | -0.862 |