Top 10 genes with highest correlation to Rv3150/nuoF:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3146/nuoB | (cc=0.8695) | info on Rv3146/nuoB |
| Rv3152/nuoH | (cc=0.8676) | info on Rv3152/nuoH |
| Rv3153/nuoI | (cc=0.8414) | info on Rv3153/nuoI |
| Rv3148/nuoD | (cc=0.8182) | info on Rv3148/nuoD |
| Rv3151/nuoG | (cc=0.7969) | info on Rv3151/nuoG |
| Rv3145/nuoA | (cc=0.7635) | info on Rv3145/nuoA |
| Rv3158/nuoN | (cc=0.7516) | info on Rv3158/nuoN |
| Rv3156/nuoL | (cc=0.7338) | info on Rv3156/nuoL |
| Rv3818/- | (cc=0.6963) | info on Rv3818/- |
| Rv1059/- | (cc=0.6944) | info on Rv1059/- |
Correlation of Rv3150/nuoF with Rv3153/nuoI
Normalized LFCs for Rv3150/nuoF:
(description and provenance of datasets)
| Rv3150/nuoF | Rv3153/nuoI | |
| Fe_supp_jason_reseq | -1.514 | -0.287 |
| low_pH_jason_reseq | -0.313 | 0.087 |
| NO_jason_reseq | -0.252 | -0.641 |
| B6_jason_reseq | -1.087 | -0.048 |
| MHCII_jason_reseq | -1.509 | -1.143 |
| Isoniazid02 | 0.611 | -0.831 |
| Rifampicin4 | 0.282 | 0.171 |
| Ethambutol3 | -0.595 | -0.833 |
| Meropenem3 | -0.847 | -1.41 |
| Vancomycin16 | -0.196 | -1.037 |
| Rv2680_day32 | 0.266 | 0.447 |
| H37Rv_KO_MarP | -0.246 | -0.653 |
| hypoxia_3wks | 1.097 | 1.089 |
| hypoxia_6wks | 0.754 | 0.8 |
| glycerol | -0.471 | 0.233 |
| cholesterol | -0.216 | -0.306 |
| AJ | -0.983 | -0.168 |
| Bibs02 | 0.55 | -0.466 |
| Bibs02c | -0.23 | 0.274 |
| BL6 | 1.845 | 1.6 |
| BL6a | 2.251 | 1.855 |
| BXD01 | 1.864 | 1.737 |
| BXD010 | 2.266 | 1.805 |
| BXD011 | 2.05 | 2.199 |
| BXD03 | 2.177 | 1.505 |
| BXD04 | 2.337 | 1.562 |
| BXD05 | 2.126 | 1.926 |
| BXD06 | 2.045 | 1.917 |
| BXD07 | 2.3 | 1.59 |
| BXD08 | 2.274 | 2.086 |
| BXD09 | 2.374 | 1.922 |
| CAST | 0.506 | 0.04 |
| CCcont | 1.451 | 1.069 |
| DS01 | 0.583 | 0.616 |
| DS02 | 0.147 | 0.896 |
| DS04 | 0.426 | 0.426 |
| DS0c | 0.969 | 1.771 |
| GP01 | 0.715 | 0.68 |
| GP02 | 0.875 | 0.875 |
| GP0c | 1.092 | 0.823 |
| NOD | -0.838 | -0.291 |
| NZO | 0.38 | 0.0 |
| PWK | -0.142 | -0.293 |
| H37Rv_KO_CtpC | 1.463 | 0.611 |
| H37Rv_KO_CtpD | 2.661 | 1.755 |
| H37Rv_KO_Rv1272 | 1.929 | 1.526 |
| H37Rv_KO_SugABC | 1.426 | 0.935 |
| H37Rv_KO_MbtN | 1.537 | 0.018 |
| Trans05 | 1.798 | 1.287 |
| macrophage_unactivated | 0.284 | -0.199 |
| IL1 | 0.267 | -0.469 |
| Rapamycin | 0.365 | -0.11 |
| Tcell | 0.746 | -0.029 |
| GMCSF | 0.388 | 0.52 |
| IFNab | 1.69 | 0.571 |
| IFNg | -0.302 | -0.294 |
| IFNg_GMCSF1 | 0.145 | -0.085 |
| Rv1432_day32 | 0.568 | 0.259 |
| Rv1565c_day32 | -0.208 | -0.218 |
| secA2_input | -0.116 | -0.379 |
| delta_Rv3594 | 0.392 | -0.647 |
| delta_Rv3717 | 0.299 | -0.211 |
| delta_Rv3811 | 0.094 | 0.0 |
| delta_Rv0954 | -0.057 | -0.526 |
| PonA1 | -0.39 | -0.396 |
| EccD1_KO | -0.474 | 0.467 |
| EspI_KO | -0.177 | 0.0 |
| PE35_KO | -0.467 | 0.592 |
| PPE68_KO | 0.0 | 0.682 |
| glycerol2 | 1.866 | 1.883 |
| lignocerate | -0.192 | -0.582 |
| oleate | 2.076 | 2.298 |
| phosphatidylcholine | -0.221 | -0.669 |
| acetate | -0.263 | -0.259 |
| glucAc | 0.587 | 0.54 |
| Rv0950ko | 0.311 | 0.136 |
| Rv1096ko | 0.639 | 0.054 |
| Rv3684ko | 0.098 | -0.18 |
| delta_otsA_trehalose | 0.965 | -0.029 |