Top 10 genes with highest correlation to Rv3038c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1973/- | (cc=0.6239) | info on Rv1973/- |
| Rv3607c/folB | (cc=0.5805) | info on Rv3607c/folB |
| Rv3163c/- | (cc=0.5798) | info on Rv3163c/- |
| Rv2232/ptkA | (cc=0.578) | info on Rv2232/ptkA |
| Rv1276c/- | (cc=0.5751) | info on Rv1276c/- |
| Rv1734c/- | (cc=0.5659) | info on Rv1734c/- |
| Rv1735c/- | (cc=0.5636) | info on Rv1735c/- |
| Rv2285/- | (cc=0.563) | info on Rv2285/- |
| Rv2489c/- | (cc=0.5417) | info on Rv2489c/- |
| Rv2174/mptA | (cc=0.5363) | info on Rv2174/mptA |
Correlation of Rv3038c/- with Rv1973/-
Normalized LFCs for Rv3038c/-:
(description and provenance of datasets)
| Rv3038c/- | Rv1973/- | |
| Fe_supp_jason_reseq | -0.923 | -0.881 |
| low_pH_jason_reseq | 0.694 | 1.139 |
| NO_jason_reseq | 1.712 | 1.339 |
| B6_jason_reseq | 1.289 | 0.457 |
| MHCII_jason_reseq | 1.357 | 0.984 |
| Isoniazid02 | 0.383 | 0.33 |
| Rifampicin4 | 0.374 | 0.712 |
| Ethambutol3 | 0.168 | 0.061 |
| Meropenem3 | 0.315 | -0.217 |
| Vancomycin16 | 0.698 | 0.846 |
| Rv2680_day32 | 0.0 | -0.459 |
| H37Rv_KO_MarP | 0.214 | 0.048 |
| hypoxia_3wks | 1.388 | 0.307 |
| hypoxia_6wks | 1.034 | -0.084 |
| glycerol | 1.69 | 0.638 |
| cholesterol | 0.703 | -0.659 |
| AJ | 1.126 | 0.417 |
| Bibs02 | 1.142 | 0.404 |
| Bibs02c | -0.564 | -1.55 |
| BL6 | -1.031 | -1.047 |
| BL6a | -0.416 | -1.296 |
| BXD01 | 0.593 | -1.28 |
| BXD010 | -1.056 | -1.968 |
| BXD011 | -0.602 | -2.528 |
| BXD03 | -1.115 | -2.961 |
| BXD04 | -0.333 | -2.129 |
| BXD05 | -0.065 | -2.528 |
| BXD06 | -0.535 | -2.26 |
| BXD07 | 0.0 | -2.384 |
| BXD08 | 0.899 | -0.474 |
| BXD09 | -1.018 | -2.092 |
| CAST | 0.0 | 0.038 |
| CCcont | -1.082 | -2.059 |
| DS01 | 1.283 | 0.879 |
| DS02 | 2.28 | -0.775 |
| DS04 | 0.822 | -1.095 |
| DS0c | 1.354 | -0.382 |
| GP01 | 0.387 | 0.942 |
| GP02 | 2.435 | 1.323 |
| GP0c | 0.173 | 1.077 |
| NOD | -0.605 | 0.652 |
| NZO | 0.348 | 0.63 |
| PWK | 0.419 | 0.369 |
| H37Rv_KO_CtpC | -0.249 | -1.15 |
| H37Rv_KO_CtpD | -0.061 | -1.694 |
| H37Rv_KO_Rv1272 | -0.775 | -2.388 |
| H37Rv_KO_SugABC | -0.718 | -2.545 |
| H37Rv_KO_MbtN | 0.137 | 0.929 |
| Trans05 | -1.077 | -0.827 |
| macrophage_unactivated | -0.338 | -0.082 |
| IL1 | -1.032 | -2.317 |
| Rapamycin | -1.488 | -3.861 |
| Tcell | -0.349 | -0.74 |
| GMCSF | -1.281 | -2.184 |
| IFNab | -1.466 | -0.877 |
| IFNg | -1.296 | -1.424 |
| IFNg_GMCSF1 | -1.093 | -0.616 |
| Rv1432_day32 | 0.799 | -0.604 |
| Rv1565c_day32 | 0.0 | -1.071 |
| secA2_input | -0.438 | 1.531 |
| delta_Rv3594 | 1.037 | 0.213 |
| delta_Rv3717 | 1.735 | 0.194 |
| delta_Rv3811 | 1.966 | 2.074 |
| delta_Rv0954 | 0.99 | 1.729 |
| PonA1 | 1.458 | 0.605 |
| EccD1_KO | 0.257 | 1.411 |
| EspI_KO | 0.0 | 0.268 |
| PE35_KO | 1.383 | -1.158 |
| PPE68_KO | 0.928 | -0.227 |
| glycerol2 | -0.263 | -0.374 |
| lignocerate | -0.983 | -0.861 |
| oleate | 0.61 | 0.642 |
| phosphatidylcholine | 0.0 | -0.405 |
| acetate | -1.814 | -1.011 |
| glucAc | -2.228 | -1.015 |
| Rv0950ko | 0.748 | -0.157 |
| Rv1096ko | 0.513 | 0.226 |
| Rv3684ko | -0.305 | -1.074 |
| delta_otsA_trehalose | 0.991 | -0.11 |