Top 10 genes with highest correlation to Rv2923c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1940/ribA1 | (cc=0.4584) | info on Rv1940/ribA1 |
| Rv2090/- | (cc=0.4053) | info on Rv2090/- |
| Rv0629c/recD | (cc=0.3946) | info on Rv0629c/recD |
| Rv2120c/- | (cc=0.3941) | info on Rv2120c/- |
| Rv2321c/rocD2 | (cc=0.3875) | info on Rv2321c/rocD2 |
| Rv0453/PPE11 | (cc=0.3869) | info on Rv0453/PPE11 |
| Rv0646c/lipG | (cc=0.3755) | info on Rv0646c/lipG |
| Rv0036c/- | (cc=0.3749) | info on Rv0036c/- |
| Rv1789/PPE26 | (cc=0.368) | info on Rv1789/PPE26 |
| Rv0491/regX3 | (cc=0.3658) | info on Rv0491/regX3 |
Correlation of Rv2923c/- with Rv2321c/rocD2
Normalized LFCs for Rv2923c/-:
(description and provenance of datasets)
| Rv2923c/- | Rv2321c/rocD2 | |
| Fe_supp_jason_reseq | 0.163 | -0.314 |
| low_pH_jason_reseq | -0.875 | -0.862 |
| NO_jason_reseq | 1.326 | -0.223 |
| B6_jason_reseq | 1.556 | -0.638 |
| MHCII_jason_reseq | -0.331 | 0.257 |
| Isoniazid02 | 0.25 | 0.055 |
| Rifampicin4 | 0.644 | 1.056 |
| Ethambutol3 | 0.575 | 0.136 |
| Meropenem3 | 0.025 | 0.467 |
| Vancomycin16 | 0.329 | 0.997 |
| Rv2680_day32 | -0.119 | -0.371 |
| H37Rv_KO_MarP | -0.195 | 0.114 |
| hypoxia_3wks | 0.136 | 0.506 |
| hypoxia_6wks | 0.493 | 0.046 |
| glycerol | 0.579 | -0.521 |
| cholesterol | 1.127 | 0.24 |
| AJ | -0.114 | -1.202 |
| Bibs02 | 1.325 | 0.673 |
| Bibs02c | -0.747 | -1.97 |
| BL6 | -1.507 | -0.582 |
| BL6a | -1.303 | -0.776 |
| BXD01 | 0.558 | 0.062 |
| BXD010 | -1.361 | -0.928 |
| BXD011 | -0.493 | 0.193 |
| BXD03 | -0.445 | 0.022 |
| BXD04 | -0.097 | 0.059 |
| BXD05 | -1.07 | -0.849 |
| BXD06 | -0.516 | 0.395 |
| BXD07 | -0.621 | 0.109 |
| BXD08 | 0.164 | -0.316 |
| BXD09 | -0.475 | -0.047 |
| CAST | -0.609 | -0.742 |
| CCcont | -1.232 | 0.048 |
| DS01 | 0.713 | 0.457 |
| DS02 | -0.427 | -0.304 |
| DS04 | 0.464 | -0.714 |
| DS0c | 1.708 | 0.36 |
| GP01 | 1.253 | 1.226 |
| GP02 | 0.194 | 2.133 |
| GP0c | 1.653 | 1.542 |
| NOD | -2.143 | 0.072 |
| NZO | -1.188 | 0.591 |
| PWK | -0.243 | -1.486 |
| H37Rv_KO_CtpC | 0.491 | 0.421 |
| H37Rv_KO_CtpD | -2.558 | -0.656 |
| H37Rv_KO_Rv1272 | 0.649 | -0.693 |
| H37Rv_KO_SugABC | 0.654 | -0.596 |
| H37Rv_KO_MbtN | 0.075 | -0.747 |
| Trans05 | 1.107 | -0.134 |
| macrophage_unactivated | 1.345 | -0.101 |
| IL1 | 0.362 | 1.136 |
| Rapamycin | 1.737 | 2.612 |
| Tcell | -0.642 | 1.088 |
| GMCSF | 1.286 | 2.426 |
| IFNab | 0.166 | 0.535 |
| IFNg | 1.539 | 0.398 |
| IFNg_GMCSF1 | 0.465 | 0.468 |
| Rv1432_day32 | 0.713 | 0.598 |
| Rv1565c_day32 | -0.13 | 0.0 |
| secA2_input | 0.279 | -0.673 |
| delta_Rv3594 | 1.12 | 0.873 |
| delta_Rv3717 | 0.361 | 0.948 |
| delta_Rv3811 | 0.977 | 1.578 |
| delta_Rv0954 | -0.547 | 1.541 |
| PonA1 | -0.777 | 0.18 |
| EccD1_KO | 0.497 | -0.786 |
| EspI_KO | -0.519 | -0.616 |
| PE35_KO | -0.782 | -0.697 |
| PPE68_KO | -0.953 | -0.195 |
| glycerol2 | -0.377 | 0.071 |
| lignocerate | -0.603 | 0.2 |
| oleate | 0.255 | 0.024 |
| phosphatidylcholine | -0.753 | 0.294 |
| acetate | -0.342 | 0.399 |
| glucAc | -1.663 | 0.321 |
| Rv0950ko | -0.193 | -0.694 |
| Rv1096ko | 0.823 | 0.069 |
| Rv3684ko | -0.21 | 0.301 |
| delta_otsA_trehalose | -0.205 | -0.631 |