Top 10 genes with highest correlation to Rv2910c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2340c/PE_PGRS39 | (cc=0.4796) | info on Rv2340c/PE_PGRS39 |
| Rv1378c/- | (cc=0.4735) | info on Rv1378c/- |
| Rv1145/mmpL13a | (cc=0.4587) | info on Rv1145/mmpL13a |
| Rv2920c/amt | (cc=0.4539) | info on Rv2920c/amt |
| Rv1192/- | (cc=0.4341) | info on Rv1192/- |
| Rv2478c/- | (cc=0.4301) | info on Rv2478c/- |
| Rv0840c/pip | (cc=0.4281) | info on Rv0840c/pip |
| Rv1140/- | (cc=0.4225) | info on Rv1140/- |
| Rv3482c/- | (cc=0.4182) | info on Rv3482c/- |
| Rv1453/- | (cc=0.414) | info on Rv1453/- |
Correlation of Rv2910c/- with Rv2920c/amt
Normalized LFCs for Rv2910c/-:
(description and provenance of datasets)
| Rv2910c/- | Rv2920c/amt | |
| Fe_supp_jason_reseq | 0.275 | 0.45 |
| low_pH_jason_reseq | -0.967 | -0.564 |
| NO_jason_reseq | 0.137 | 0.748 |
| B6_jason_reseq | 0.127 | 0.818 |
| MHCII_jason_reseq | 1.187 | 1.689 |
| Isoniazid02 | 0.841 | 0.036 |
| Rifampicin4 | 0.203 | 0.0 |
| Ethambutol3 | 0.951 | 0.19 |
| Meropenem3 | 1.054 | -0.126 |
| Vancomycin16 | 0.761 | 0.0 |
| Rv2680_day32 | -0.397 | -0.647 |
| H37Rv_KO_MarP | 1.229 | 0.133 |
| hypoxia_3wks | 0.738 | -0.044 |
| hypoxia_6wks | -0.66 | -0.184 |
| glycerol | -0.434 | -0.532 |
| cholesterol | 0.521 | -0.347 |
| AJ | -0.039 | 0.086 |
| Bibs02 | 0.931 | 0.197 |
| Bibs02c | 1.206 | 0.153 |
| BL6 | -0.485 | -0.86 |
| BL6a | 0.367 | -0.725 |
| BXD01 | 0.121 | -0.12 |
| BXD010 | -0.096 | -0.379 |
| BXD011 | -0.555 | -0.623 |
| BXD03 | 0.373 | -0.506 |
| BXD04 | 1.308 | 0.662 |
| BXD05 | -1.224 | -0.541 |
| BXD06 | -0.172 | -0.238 |
| BXD07 | -0.784 | -1.003 |
| BXD08 | -0.564 | -0.511 |
| BXD09 | -0.169 | -0.744 |
| CAST | 0.018 | -0.058 |
| CCcont | 0.024 | -0.686 |
| DS01 | 0.469 | -0.029 |
| DS02 | 1.204 | -0.323 |
| DS04 | 0.278 | -0.45 |
| DS0c | 0.25 | 0.938 |
| GP01 | -1.505 | -0.051 |
| GP02 | -0.46 | -0.961 |
| GP0c | -0.229 | -1.135 |
| NOD | -0.417 | -0.028 |
| NZO | 0.5 | -0.282 |
| PWK | 0.695 | -0.101 |
| H37Rv_KO_CtpC | -1.19 | -0.827 |
| H37Rv_KO_CtpD | 0.533 | -0.658 |
| H37Rv_KO_Rv1272 | -0.144 | -0.017 |
| H37Rv_KO_SugABC | -0.174 | -0.611 |
| H37Rv_KO_MbtN | 0.902 | -0.994 |
| Trans05 | -0.979 | -1.179 |
| macrophage_unactivated | -0.139 | 0.344 |
| IL1 | -0.602 | -1.094 |
| Rapamycin | -0.135 | -0.755 |
| Tcell | 0.046 | 0.046 |
| GMCSF | -0.364 | -0.037 |
| IFNab | -0.986 | -1.521 |
| IFNg | -1.392 | -0.986 |
| IFNg_GMCSF1 | -0.434 | -1.046 |
| Rv1432_day32 | -0.464 | 0.4 |
| Rv1565c_day32 | -0.019 | 0.425 |
| secA2_input | 0.131 | -0.642 |
| delta_Rv3594 | -0.22 | 0.425 |
| delta_Rv3717 | -0.011 | -0.069 |
| delta_Rv3811 | -0.14 | -0.138 |
| delta_Rv0954 | 0.158 | 0.452 |
| PonA1 | -0.286 | -0.398 |
| EccD1_KO | -0.691 | 0.0 |
| EspI_KO | -0.288 | -0.479 |
| PE35_KO | 0.306 | 0.312 |
| PPE68_KO | -0.25 | -0.426 |
| glycerol2 | 0.188 | 0.062 |
| lignocerate | 0.045 | 0.085 |
| oleate | -0.394 | 0.204 |
| phosphatidylcholine | -0.027 | 0.109 |
| acetate | 0.293 | -0.642 |
| glucAc | -0.09 | -0.363 |
| Rv0950ko | 0.259 | 0.621 |
| Rv1096ko | -0.926 | -0.145 |
| Rv3684ko | -0.065 | 0.154 |
| delta_otsA_trehalose | -0.447 | -0.34 |