Top 10 genes with highest correlation to Rv2910c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2340c/PE_PGRS39 | (cc=0.4796) | info on Rv2340c/PE_PGRS39 |
| Rv1378c/- | (cc=0.4735) | info on Rv1378c/- |
| Rv1145/mmpL13a | (cc=0.4587) | info on Rv1145/mmpL13a |
| Rv2920c/amt | (cc=0.4539) | info on Rv2920c/amt |
| Rv1192/- | (cc=0.4341) | info on Rv1192/- |
| Rv2478c/- | (cc=0.4301) | info on Rv2478c/- |
| Rv0840c/pip | (cc=0.4281) | info on Rv0840c/pip |
| Rv1140/- | (cc=0.4225) | info on Rv1140/- |
| Rv3482c/- | (cc=0.4182) | info on Rv3482c/- |
| Rv1453/- | (cc=0.414) | info on Rv1453/- |
Correlation of Rv2910c/- with Rv1145/mmpL13a
Normalized LFCs for Rv2910c/-:
(description and provenance of datasets)
| Rv2910c/- | Rv1145/mmpL13a | |
| Fe_supp_jason_reseq | 0.275 | 1.17 |
| low_pH_jason_reseq | -0.967 | -0.962 |
| NO_jason_reseq | 0.137 | -0.648 |
| B6_jason_reseq | 0.127 | 0.054 |
| MHCII_jason_reseq | 1.187 | 0.472 |
| Isoniazid02 | 0.841 | 0.327 |
| Rifampicin4 | 0.203 | 0.0 |
| Ethambutol3 | 0.951 | 2.5 |
| Meropenem3 | 1.054 | 0.218 |
| Vancomycin16 | 0.761 | 0.483 |
| Rv2680_day32 | -0.397 | -1.101 |
| H37Rv_KO_MarP | 1.229 | 0.82 |
| hypoxia_3wks | 0.738 | 0.092 |
| hypoxia_6wks | -0.66 | -0.578 |
| glycerol | -0.434 | -0.385 |
| cholesterol | 0.521 | -0.63 |
| AJ | -0.039 | 0.193 |
| Bibs02 | 0.931 | 0.478 |
| Bibs02c | 1.206 | 0.708 |
| BL6 | -0.485 | -0.888 |
| BL6a | 0.367 | -0.118 |
| BXD01 | 0.121 | -0.404 |
| BXD010 | -0.096 | -1.107 |
| BXD011 | -0.555 | -0.923 |
| BXD03 | 0.373 | 0.201 |
| BXD04 | 1.308 | 0.372 |
| BXD05 | -1.224 | -0.615 |
| BXD06 | -0.172 | -0.414 |
| BXD07 | -0.784 | -1.044 |
| BXD08 | -0.564 | 0.831 |
| BXD09 | -0.169 | -0.28 |
| CAST | 0.018 | -0.399 |
| CCcont | 0.024 | -0.538 |
| DS01 | 0.469 | 0.291 |
| DS02 | 1.204 | 0.666 |
| DS04 | 0.278 | 0.822 |
| DS0c | 0.25 | 1.081 |
| GP01 | -1.505 | -0.462 |
| GP02 | -0.46 | 1.14 |
| GP0c | -0.229 | 0.273 |
| NOD | -0.417 | 0.348 |
| NZO | 0.5 | -0.134 |
| PWK | 0.695 | 0.352 |
| H37Rv_KO_CtpC | -1.19 | 0.673 |
| H37Rv_KO_CtpD | 0.533 | 2.037 |
| H37Rv_KO_Rv1272 | -0.144 | 0.432 |
| H37Rv_KO_SugABC | -0.174 | 0.591 |
| H37Rv_KO_MbtN | 0.902 | 0.0 |
| Trans05 | -0.979 | -1.315 |
| macrophage_unactivated | -0.139 | -0.597 |
| IL1 | -0.602 | -1.7 |
| Rapamycin | -0.135 | -0.5 |
| Tcell | 0.046 | -0.531 |
| GMCSF | -0.364 | -0.758 |
| IFNab | -0.986 | -1.626 |
| IFNg | -1.392 | -0.652 |
| IFNg_GMCSF1 | -0.434 | 0.424 |
| Rv1432_day32 | -0.464 | 0.021 |
| Rv1565c_day32 | -0.019 | 0.43 |
| secA2_input | 0.131 | -2.465 |
| delta_Rv3594 | -0.22 | -0.063 |
| delta_Rv3717 | -0.011 | -0.172 |
| delta_Rv3811 | -0.14 | 0.012 |
| delta_Rv0954 | 0.158 | 0.209 |
| PonA1 | -0.286 | 0.679 |
| EccD1_KO | -0.691 | -0.704 |
| EspI_KO | -0.288 | -0.057 |
| PE35_KO | 0.306 | -0.149 |
| PPE68_KO | -0.25 | 0.064 |
| glycerol2 | 0.188 | 0.015 |
| lignocerate | 0.045 | 0.283 |
| oleate | -0.394 | 0.234 |
| phosphatidylcholine | -0.027 | 0.522 |
| acetate | 0.293 | 0.053 |
| glucAc | -0.09 | 0.22 |
| Rv0950ko | 0.259 | 0.262 |
| Rv1096ko | -0.926 | 0.229 |
| Rv3684ko | -0.065 | 0.0 |
| delta_otsA_trehalose | -0.447 | -0.546 |