Top 10 genes with highest correlation to Rv2332/mez:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3018c/PPE46 | (cc=0.6556) | info on Rv3018c/PPE46 |
| Rv2958c/- | (cc=0.6158) | info on Rv2958c/- |
| Rv3136A/- | (cc=0.5801) | info on Rv3136A/- |
| Rv1056/- | (cc=0.5729) | info on Rv1056/- |
| Rv1614/lgt | (cc=0.5638) | info on Rv1614/lgt |
| Rv0846c/- | (cc=0.551) | info on Rv0846c/- |
| Rv1182/papA3 | (cc=0.5508) | info on Rv1182/papA3 |
| Rv0686/- | (cc=0.5378) | info on Rv0686/- |
| Rv2517c/- | (cc=0.5354) | info on Rv2517c/- |
| Rv3784/- | (cc=0.5243) | info on Rv3784/- |
Correlation of Rv2332/mez with Rv3136A/-
Normalized LFCs for Rv2332/mez:
(description and provenance of datasets)
| Rv2332/mez | Rv3136A/- | |
| Fe_supp_jason_reseq | 0.751 | 1.127 |
| low_pH_jason_reseq | -0.437 | -0.478 |
| NO_jason_reseq | -0.076 | 0.179 |
| B6_jason_reseq | 0.227 | 0.81 |
| MHCII_jason_reseq | 0.472 | 0.619 |
| Isoniazid02 | 1.672 | 2.03 |
| Rifampicin4 | 0.181 | 0.0 |
| Ethambutol3 | 0.955 | 2.81 |
| Meropenem3 | 0.319 | 2.511 |
| Vancomycin16 | 0.424 | -0.692 |
| Rv2680_day32 | 0.305 | 0.279 |
| H37Rv_KO_MarP | 0.356 | 1.388 |
| hypoxia_3wks | 0.363 | 0.231 |
| hypoxia_6wks | 0.0 | -0.898 |
| glycerol | -0.806 | -2.093 |
| cholesterol | -0.336 | -1.879 |
| AJ | 0.534 | -1.138 |
| Bibs02 | 0.246 | -0.8 |
| Bibs02c | 0.091 | -0.72 |
| BL6 | -0.165 | -1.346 |
| BL6a | -0.06 | -1.179 |
| BXD01 | -0.059 | -1.104 |
| BXD010 | -0.243 | -1.484 |
| BXD011 | 0.103 | -1.203 |
| BXD03 | -0.4 | -1.241 |
| BXD04 | 0.25 | -0.514 |
| BXD05 | -0.103 | -1.319 |
| BXD06 | -0.041 | -1.018 |
| BXD07 | 0.08 | -1.37 |
| BXD08 | -0.276 | -1.227 |
| BXD09 | 0.225 | -1.377 |
| CAST | 0.557 | -0.45 |
| CCcont | -0.365 | -1.683 |
| DS01 | 0.046 | -1.489 |
| DS02 | -0.099 | -0.975 |
| DS04 | 0.423 | -0.696 |
| DS0c | -0.179 | -1.326 |
| GP01 | -0.279 | -0.861 |
| GP02 | -0.658 | 0.397 |
| GP0c | -1.335 | -2.4 |
| NOD | 0.747 | -0.07 |
| NZO | 0.552 | -0.548 |
| PWK | 0.364 | -0.594 |
| H37Rv_KO_CtpC | -0.16 | -0.46 |
| H37Rv_KO_CtpD | 0.103 | -0.966 |
| H37Rv_KO_Rv1272 | 0.208 | -1.468 |
| H37Rv_KO_SugABC | 0.444 | -0.222 |
| H37Rv_KO_MbtN | 0.074 | -1.743 |
| Trans05 | 0.874 | -0.575 |
| macrophage_unactivated | -0.3 | -1.092 |
| IL1 | -0.362 | -1.071 |
| Rapamycin | -0.752 | -1.608 |
| Tcell | -0.609 | -0.678 |
| GMCSF | -0.752 | -0.782 |
| IFNab | -0.396 | -2.279 |
| IFNg | -1.101 | -1.208 |
| IFNg_GMCSF1 | -0.927 | -0.93 |
| Rv1432_day32 | 0.81 | 0.819 |
| Rv1565c_day32 | 0.376 | -0.333 |
| secA2_input | -0.794 | 0.161 |
| delta_Rv3594 | -0.257 | -0.344 |
| delta_Rv3717 | -0.614 | -1.354 |
| delta_Rv3811 | -0.228 | -0.413 |
| delta_Rv0954 | -0.497 | -0.16 |
| PonA1 | 0.433 | 0.132 |
| EccD1_KO | 0.464 | 0.151 |
| EspI_KO | 0.707 | -0.416 |
| PE35_KO | 0.368 | 0.925 |
| PPE68_KO | 0.477 | 0.771 |
| glycerol2 | 0.67 | 0.186 |
| lignocerate | 0.664 | -0.486 |
| oleate | 0.543 | 0.319 |
| phosphatidylcholine | 0.647 | -0.02 |
| acetate | 0.221 | 0.047 |
| glucAc | 0.187 | 0.104 |
| Rv0950ko | -0.555 | -0.422 |
| Rv1096ko | -0.79 | -0.648 |
| Rv3684ko | -1.294 | -1.215 |
| delta_otsA_trehalose | -0.092 | -0.196 |