Top 10 genes with highest correlation to Rv2332/mez:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3018c/PPE46 | (cc=0.6556) | info on Rv3018c/PPE46 |
| Rv2958c/- | (cc=0.6158) | info on Rv2958c/- |
| Rv3136A/- | (cc=0.5801) | info on Rv3136A/- |
| Rv1056/- | (cc=0.5729) | info on Rv1056/- |
| Rv1614/lgt | (cc=0.5638) | info on Rv1614/lgt |
| Rv0846c/- | (cc=0.551) | info on Rv0846c/- |
| Rv1182/papA3 | (cc=0.5508) | info on Rv1182/papA3 |
| Rv0686/- | (cc=0.5378) | info on Rv0686/- |
| Rv2517c/- | (cc=0.5354) | info on Rv2517c/- |
| Rv3784/- | (cc=0.5243) | info on Rv3784/- |
Correlation of Rv2332/mez with Rv2517c/-
Normalized LFCs for Rv2332/mez:
(description and provenance of datasets)
| Rv2332/mez | Rv2517c/- | |
| Fe_supp_jason_reseq | 0.751 | -0.306 |
| low_pH_jason_reseq | -0.437 | -1.091 |
| NO_jason_reseq | -0.076 | -0.601 |
| B6_jason_reseq | 0.227 | 0.386 |
| MHCII_jason_reseq | 0.472 | -0.061 |
| Isoniazid02 | 1.672 | -0.026 |
| Rifampicin4 | 0.181 | -0.59 |
| Ethambutol3 | 0.955 | -0.265 |
| Meropenem3 | 0.319 | -0.526 |
| Vancomycin16 | 0.424 | -0.119 |
| Rv2680_day32 | 0.305 | 0.049 |
| H37Rv_KO_MarP | 0.356 | 0.674 |
| hypoxia_3wks | 0.363 | -0.048 |
| hypoxia_6wks | 0.0 | -1.034 |
| glycerol | -0.806 | -1.513 |
| cholesterol | -0.336 | -0.443 |
| AJ | 0.534 | 0.371 |
| Bibs02 | 0.246 | 0.05 |
| Bibs02c | 0.091 | -0.317 |
| BL6 | -0.165 | -2.66 |
| BL6a | -0.06 | -1.403 |
| BXD01 | -0.059 | -0.843 |
| BXD010 | -0.243 | -1.406 |
| BXD011 | 0.103 | -0.622 |
| BXD03 | -0.4 | -2.026 |
| BXD04 | 0.25 | -1.197 |
| BXD05 | -0.103 | -0.426 |
| BXD06 | -0.041 | -2.0 |
| BXD07 | 0.08 | -0.649 |
| BXD08 | -0.276 | -1.864 |
| BXD09 | 0.225 | -1.21 |
| CAST | 0.557 | -0.469 |
| CCcont | -0.365 | -1.673 |
| DS01 | 0.046 | -0.801 |
| DS02 | -0.099 | -0.978 |
| DS04 | 0.423 | 0.008 |
| DS0c | -0.179 | -0.847 |
| GP01 | -0.279 | -0.297 |
| GP02 | -0.658 | 0.068 |
| GP0c | -1.335 | -1.863 |
| NOD | 0.747 | 0.124 |
| NZO | 0.552 | 1.497 |
| PWK | 0.364 | -0.088 |
| H37Rv_KO_CtpC | -0.16 | -0.587 |
| H37Rv_KO_CtpD | 0.103 | -0.897 |
| H37Rv_KO_Rv1272 | 0.208 | -1.268 |
| H37Rv_KO_SugABC | 0.444 | 0.962 |
| H37Rv_KO_MbtN | 0.074 | -1.354 |
| Trans05 | 0.874 | 1.562 |
| macrophage_unactivated | -0.3 | -0.669 |
| IL1 | -0.362 | -0.673 |
| Rapamycin | -0.752 | -0.601 |
| Tcell | -0.609 | -0.264 |
| GMCSF | -0.752 | -0.177 |
| IFNab | -0.396 | -2.431 |
| IFNg | -1.101 | -1.227 |
| IFNg_GMCSF1 | -0.927 | -1.332 |
| Rv1432_day32 | 0.81 | 0.975 |
| Rv1565c_day32 | 0.376 | 0.0 |
| secA2_input | -0.794 | -1.382 |
| delta_Rv3594 | -0.257 | -0.821 |
| delta_Rv3717 | -0.614 | -1.189 |
| delta_Rv3811 | -0.228 | -0.784 |
| delta_Rv0954 | -0.497 | 0.0 |
| PonA1 | 0.433 | -0.517 |
| EccD1_KO | 0.464 | -0.076 |
| EspI_KO | 0.707 | 0.861 |
| PE35_KO | 0.368 | 0.691 |
| PPE68_KO | 0.477 | 0.787 |
| glycerol2 | 0.67 | 0.021 |
| lignocerate | 0.664 | 0.358 |
| oleate | 0.543 | 0.434 |
| phosphatidylcholine | 0.647 | 0.797 |
| acetate | 0.221 | 0.509 |
| glucAc | 0.187 | 0.264 |
| Rv0950ko | -0.555 | 0.555 |
| Rv1096ko | -0.79 | -0.443 |
| Rv3684ko | -1.294 | -0.249 |
| delta_otsA_trehalose | -0.092 | -1.833 |