Top 10 genes with highest correlation to Rv2234/ptpA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0446c/- | (cc=0.4282) | info on Rv0446c/- |
| Rv0173/lprK | (cc=0.4183) | info on Rv0173/lprK |
| Rv1131/prpC | (cc=0.4099) | info on Rv1131/prpC |
| Rv0380c/- | (cc=0.3919) | info on Rv0380c/- |
| Rv2218/lipA | (cc=0.3869) | info on Rv2218/lipA |
| Rv0926c/- | (cc=0.3853) | info on Rv0926c/- |
| Rv3025c/iscS | (cc=0.3829) | info on Rv3025c/iscS |
| Rv0855/far | (cc=0.376) | info on Rv0855/far |
| Rv2857c/- | (cc=0.373) | info on Rv2857c/- |
| Rv3763/lpqH | (cc=0.3662) | info on Rv3763/lpqH |
Correlation of Rv2234/ptpA with Rv0926c/-
Normalized LFCs for Rv2234/ptpA:
(description and provenance of datasets)
| Rv2234/ptpA | Rv0926c/- | |
| Fe_supp_jason_reseq | 1.032 | 0.06 |
| low_pH_jason_reseq | -0.714 | 0.519 |
| NO_jason_reseq | 0.971 | 0.05 |
| B6_jason_reseq | -0.143 | -0.357 |
| MHCII_jason_reseq | 1.228 | 0.709 |
| Isoniazid02 | 0.0 | 0.895 |
| Rifampicin4 | 0.539 | 0.761 |
| Ethambutol3 | 0.207 | 0.927 |
| Meropenem3 | 0.22 | 0.022 |
| Vancomycin16 | 0.17 | 0.414 |
| Rv2680_day32 | -1.672 | -1.629 |
| H37Rv_KO_MarP | 1.23 | 0.12 |
| hypoxia_3wks | 0.299 | -0.104 |
| hypoxia_6wks | 0.418 | -1.303 |
| glycerol | 0.547 | 0.63 |
| cholesterol | -0.645 | 0.111 |
| AJ | 0.145 | -0.629 |
| Bibs02 | -0.536 | -0.391 |
| Bibs02c | -1.905 | -0.899 |
| BL6 | 0.151 | 0.28 |
| BL6a | -0.527 | 0.274 |
| BXD01 | -0.057 | 0.015 |
| BXD010 | -0.358 | 0.814 |
| BXD011 | -0.084 | 0.753 |
| BXD03 | -0.397 | 0.79 |
| BXD04 | 1.19 | 0.552 |
| BXD05 | 0.2 | 0.443 |
| BXD06 | -0.51 | 0.634 |
| BXD07 | 0.927 | 0.638 |
| BXD08 | 0.258 | 0.298 |
| BXD09 | -0.158 | 0.414 |
| CAST | 0.624 | 0.474 |
| CCcont | 0.622 | 0.621 |
| DS01 | -0.265 | -0.224 |
| DS02 | -1.355 | -0.347 |
| DS04 | 0.101 | -0.388 |
| DS0c | -0.432 | -0.493 |
| GP01 | -0.347 | -1.476 |
| GP02 | 0.489 | -0.641 |
| GP0c | -0.31 | -0.451 |
| NOD | -1.152 | -0.132 |
| NZO | -0.92 | 0.131 |
| PWK | -0.575 | 0.108 |
| H37Rv_KO_CtpC | 0.165 | 0.918 |
| H37Rv_KO_CtpD | 0.706 | -0.015 |
| H37Rv_KO_Rv1272 | -0.356 | 0.25 |
| H37Rv_KO_SugABC | 0.91 | 0.672 |
| H37Rv_KO_MbtN | -0.034 | -0.657 |
| Trans05 | 0.661 | 0.862 |
| macrophage_unactivated | 1.247 | 0.35 |
| IL1 | 0.193 | 0.353 |
| Rapamycin | -1.114 | 0.838 |
| Tcell | -0.042 | -0.088 |
| GMCSF | 0.106 | 1.278 |
| IFNab | 0.348 | 0.623 |
| IFNg | 0.802 | 1.243 |
| IFNg_GMCSF1 | -0.085 | 1.81 |
| Rv1432_day32 | -0.098 | 0.0 |
| Rv1565c_day32 | -0.674 | -0.112 |
| secA2_input | 0.756 | 0.556 |
| delta_Rv3594 | -0.252 | 0.359 |
| delta_Rv3717 | -0.367 | -0.272 |
| delta_Rv3811 | -0.036 | 0.0 |
| delta_Rv0954 | -0.6 | 0.457 |
| PonA1 | -0.783 | -0.431 |
| EccD1_KO | -0.286 | -0.724 |
| EspI_KO | -1.158 | 0.242 |
| PE35_KO | -1.076 | -0.403 |
| PPE68_KO | -1.609 | -0.442 |
| glycerol2 | -0.525 | 0.113 |
| lignocerate | -0.541 | -0.196 |
| oleate | -0.291 | -0.364 |
| phosphatidylcholine | -0.126 | -0.204 |
| acetate | -0.738 | -0.023 |
| glucAc | -0.471 | 0.056 |
| Rv0950ko | 0.938 | 1.067 |
| Rv1096ko | 1.532 | 0.754 |
| Rv3684ko | -0.233 | 0.684 |
| delta_otsA_trehalose | 1.289 | -0.311 |