TnSeqCorr

Top 10 genes with highest correlation to Rv2070c/cobK:

update plotcorrelationlink to info on gene
Rv3829c/- (cc=0.4855) info on Rv3829c/-
Rv2977c/thiL (cc=0.4358) info on Rv2977c/thiL
Rv1215c/- (cc=0.419) info on Rv1215c/-
Rv1785c/cyp143 (cc=0.418) info on Rv1785c/cyp143
Rv1508A/- (cc=0.3987) info on Rv1508A/-
Rv0467/icl1 (cc=0.3931) info on Rv0467/icl1
Rv0844c/narL (cc=0.3848) info on Rv0844c/narL
Rv1627c/- (cc=0.3742) info on Rv1627c/-
Rv1932/tpx (cc=0.3709) info on Rv1932/tpx
Rv3657c/- (cc=0.362) info on Rv3657c/-

Correlation of Rv2070c/cobK with Rv1932/tpx

Normalized LFCs for Rv2070c/cobK:
(description and provenance of datasets)
Rv2070c/cobKRv1932/tpx
Fe_supp_jason_reseq

-1.768

-0.049

low_pH_jason_reseq

0.301

0.955

NO_jason_reseq

0.034

-1.2

B6_jason_reseq

-1.547

-2.634

MHCII_jason_reseq

-1.779

-1.876

Isoniazid02

-0.383

-1.116

Rifampicin4

0.065

1.056

Ethambutol3

2.239

2.13

Meropenem3

-0.576

-0.274

Vancomycin16

-0.13

-0.316

Rv2680_day32

0.443

-0.898

H37Rv_KO_MarP

0.594

1.497

hypoxia_3wks

0.319

-0.187

hypoxia_6wks

-0.269

0.685

glycerol

0.573

-0.562

cholesterol

-0.315

-0.279

AJ

0.734

-1.845

Bibs02

-1.874

-0.982

Bibs02c

-1.426

-0.403

BL6

0.972

-0.129

BL6a

-0.54

-0.501

BXD01

-1.001

-0.54

BXD010

-0.722

-0.549

BXD011

-0.582

-0.404

BXD03

0.573

-1.02

BXD04

-0.113

-0.344

BXD05

0.93

-1.157

BXD06

-0.219

-0.879

BXD07

-0.416

-0.677

BXD08

-0.09

-1.204

BXD09

-0.031

-0.623

CAST

0.577

-1.393

CCcont

0.064

0.386

DS01

0.592

-0.4

DS02

0.268

-1.391

DS04

0.122

-0.263

DS0c

1.548

0.02

GP01

0.247

0.038

GP02

1.263

1.125

GP0c

0.659

0.144

NOD

0.361

-0.742

NZO

0.321

-1.715

PWK

-0.479

-0.058

H37Rv_KO_CtpC

0.0

-0.371

H37Rv_KO_CtpD

1.398

-0.857

H37Rv_KO_Rv1272

0.975

-0.485

H37Rv_KO_SugABC

-1.204

-0.874

H37Rv_KO_MbtN

-0.119

-1.007

Trans05

0.135

-0.522

macrophage_unactivated

-0.189

1.446

IL1

-0.558

-1.246

Rapamycin

0.264

0.0

Tcell

-0.196

-0.319

GMCSF

0.895

-0.217

IFNab

1.363

-0.048

IFNg

0.649

-0.695

IFNg_GMCSF1

-0.591

0.242

Rv1432_day32

-0.591

-1.395

Rv1565c_day32

-0.948

-1.404

secA2_input

0.678

0.554

delta_Rv3594

-0.136

-0.702

delta_Rv3717

-1.078

-1.277

delta_Rv3811

0.031

0.106

delta_Rv0954

-0.205

0.836

PonA1

0.416

0.541

EccD1_KO

0.362

-0.493

EspI_KO

0.961

-0.04

PE35_KO

1.07

1.552

PPE68_KO

2.109

0.835

glycerol2

-0.604

0.5

lignocerate

-0.179

-0.302

oleate

-0.611

-0.037

phosphatidylcholine

-0.206

-0.929

acetate

-0.078

1.014

glucAc

0.556

0.328

Rv0950ko

-1.432

0.567

Rv1096ko

0.296

0.422

Rv3684ko

-0.812

-1.477

delta_otsA_trehalose

-0.254

0.684