Top 10 genes with highest correlation to Rv2062c/cobN:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0843/- | (cc=0.6718) | info on Rv0843/- |
| Rv3026c/- | (cc=0.6323) | info on Rv3026c/- |
| Rv3566c/nat | (cc=0.607) | info on Rv3566c/nat |
| Rv1997/ctpF | (cc=0.5839) | info on Rv1997/ctpF |
| Rv0849/- | (cc=0.5778) | info on Rv0849/- |
| Rv0488/- | (cc=0.5512) | info on Rv0488/- |
| Rv3065/mmr | (cc=0.5512) | info on Rv3065/mmr |
| Rv0570/nrdZ | (cc=0.5263) | info on Rv0570/nrdZ |
| Rv2306A/- | (cc=0.5182) | info on Rv2306A/- |
| Rv1834/lipZ | (cc=0.5124) | info on Rv1834/lipZ |
Correlation of Rv2062c/cobN with Rv3566c/nat
Normalized LFCs for Rv2062c/cobN:
(description and provenance of datasets)
| Rv2062c/cobN | Rv3566c/nat | |
| Fe_supp_jason_reseq | -0.444 | -1.146 |
| low_pH_jason_reseq | -0.746 | -1.036 |
| NO_jason_reseq | -0.299 | -0.945 |
| B6_jason_reseq | 0.135 | -0.353 |
| MHCII_jason_reseq | -0.388 | 0.687 |
| Isoniazid02 | -0.851 | -3.683 |
| Rifampicin4 | 0.338 | 0.801 |
| Ethambutol3 | -0.946 | -3.539 |
| Meropenem3 | -1.174 | -2.94 |
| Vancomycin16 | -0.451 | -0.788 |
| Rv2680_day32 | 0.197 | 0.751 |
| H37Rv_KO_MarP | -0.106 | 0.461 |
| hypoxia_3wks | -0.175 | 0.14 |
| hypoxia_6wks | 0.384 | -0.309 |
| glycerol | -0.6 | 0.039 |
| cholesterol | 0.017 | -0.366 |
| AJ | 0.355 | 0.067 |
| Bibs02 | 0.298 | -0.331 |
| Bibs02c | 0.32 | -0.355 |
| BL6 | -0.107 | -0.024 |
| BL6a | -0.527 | -1.534 |
| BXD01 | -0.233 | -0.577 |
| BXD010 | -0.719 | -0.819 |
| BXD011 | -1.168 | -1.487 |
| BXD03 | -0.843 | -0.641 |
| BXD04 | -0.598 | -0.791 |
| BXD05 | -0.531 | -2.162 |
| BXD06 | -0.723 | -0.98 |
| BXD07 | -0.477 | -1.46 |
| BXD08 | -0.525 | -0.122 |
| BXD09 | -0.789 | -1.409 |
| CAST | 0.28 | -0.115 |
| CCcont | -0.353 | -0.707 |
| DS01 | 0.212 | 0.715 |
| DS02 | 0.717 | 0.578 |
| DS04 | 0.975 | 0.038 |
| DS0c | -0.185 | 0.493 |
| GP01 | -0.442 | -1.347 |
| GP02 | 0.767 | -0.19 |
| GP0c | -0.469 | -1.118 |
| NOD | -0.192 | 0.21 |
| NZO | 0.0 | 0.545 |
| PWK | -0.219 | -0.401 |
| H37Rv_KO_CtpC | -0.291 | -0.275 |
| H37Rv_KO_CtpD | 0.154 | -1.176 |
| H37Rv_KO_Rv1272 | -0.313 | 0.31 |
| H37Rv_KO_SugABC | 0.658 | 0.084 |
| H37Rv_KO_MbtN | 0.331 | -0.659 |
| Trans05 | 0.172 | -1.012 |
| macrophage_unactivated | -0.65 | -0.783 |
| IL1 | -0.78 | -1.409 |
| Rapamycin | -0.387 | -0.853 |
| Tcell | -0.671 | -1.326 |
| GMCSF | -0.129 | -0.422 |
| IFNab | -0.224 | -2.252 |
| IFNg | -0.551 | -1.269 |
| IFNg_GMCSF1 | 0.434 | -0.503 |
| Rv1432_day32 | 0.458 | -0.072 |
| Rv1565c_day32 | -0.13 | 0.747 |
| secA2_input | -0.545 | -0.678 |
| delta_Rv3594 | -0.135 | 0.102 |
| delta_Rv3717 | 0.122 | -0.571 |
| delta_Rv3811 | -0.086 | 0.693 |
| delta_Rv0954 | -0.322 | -0.547 |
| PonA1 | 0.032 | 0.594 |
| EccD1_KO | 1.046 | 0.378 |
| EspI_KO | 0.528 | -0.234 |
| PE35_KO | 0.169 | 0.496 |
| PPE68_KO | 0.246 | -0.064 |
| glycerol2 | 0.143 | -0.151 |
| lignocerate | 0.55 | -0.237 |
| oleate | 0.088 | -0.214 |
| phosphatidylcholine | 0.224 | -0.112 |
| acetate | 0.479 | -0.274 |
| glucAc | 0.385 | -0.248 |
| Rv0950ko | 0.41 | -0.464 |
| Rv1096ko | 0.464 | 0.663 |
| Rv3684ko | 0.445 | -0.183 |
| delta_otsA_trehalose | -0.953 | -1.003 |