Top 10 genes with highest correlation to Rv2062c/cobN:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0843/- | (cc=0.6718) | info on Rv0843/- |
| Rv3026c/- | (cc=0.6323) | info on Rv3026c/- |
| Rv3566c/nat | (cc=0.607) | info on Rv3566c/nat |
| Rv1997/ctpF | (cc=0.5839) | info on Rv1997/ctpF |
| Rv0849/- | (cc=0.5778) | info on Rv0849/- |
| Rv0488/- | (cc=0.5512) | info on Rv0488/- |
| Rv3065/mmr | (cc=0.5512) | info on Rv3065/mmr |
| Rv0570/nrdZ | (cc=0.5263) | info on Rv0570/nrdZ |
| Rv2306A/- | (cc=0.5182) | info on Rv2306A/- |
| Rv1834/lipZ | (cc=0.5124) | info on Rv1834/lipZ |
Correlation of Rv2062c/cobN with Rv3065/mmr
Normalized LFCs for Rv2062c/cobN:
(description and provenance of datasets)
| Rv2062c/cobN | Rv3065/mmr | |
| Fe_supp_jason_reseq | -0.444 | -0.647 |
| low_pH_jason_reseq | -0.746 | -1.335 |
| NO_jason_reseq | -0.299 | -0.911 |
| B6_jason_reseq | 0.135 | -0.65 |
| MHCII_jason_reseq | -0.388 | 0.12 |
| Isoniazid02 | -0.851 | -1.314 |
| Rifampicin4 | 0.338 | -0.301 |
| Ethambutol3 | -0.946 | 0.24 |
| Meropenem3 | -1.174 | -1.063 |
| Vancomycin16 | -0.451 | -1.149 |
| Rv2680_day32 | 0.197 | 0.75 |
| H37Rv_KO_MarP | -0.106 | -0.042 |
| hypoxia_3wks | -0.175 | -1.113 |
| hypoxia_6wks | 0.384 | 0.115 |
| glycerol | -0.6 | -0.53 |
| cholesterol | 0.017 | -0.807 |
| AJ | 0.355 | 0.072 |
| Bibs02 | 0.298 | 0.209 |
| Bibs02c | 0.32 | 0.117 |
| BL6 | -0.107 | -0.318 |
| BL6a | -0.527 | -0.178 |
| BXD01 | -0.233 | -0.435 |
| BXD010 | -0.719 | 0.121 |
| BXD011 | -1.168 | 0.109 |
| BXD03 | -0.843 | -0.5 |
| BXD04 | -0.598 | -0.514 |
| BXD05 | -0.531 | -0.658 |
| BXD06 | -0.723 | -0.417 |
| BXD07 | -0.477 | -1.043 |
| BXD08 | -0.525 | -0.713 |
| BXD09 | -0.789 | -0.439 |
| CAST | 0.28 | 0.482 |
| CCcont | -0.353 | -0.46 |
| DS01 | 0.212 | 0.684 |
| DS02 | 0.717 | 0.315 |
| DS04 | 0.975 | 0.055 |
| DS0c | -0.185 | -0.091 |
| GP01 | -0.442 | 0.21 |
| GP02 | 0.767 | 0.709 |
| GP0c | -0.469 | 0.091 |
| NOD | -0.192 | 0.656 |
| NZO | 0.0 | -0.185 |
| PWK | -0.219 | 0.162 |
| H37Rv_KO_CtpC | -0.291 | 0.285 |
| H37Rv_KO_CtpD | 0.154 | 0.265 |
| H37Rv_KO_Rv1272 | -0.313 | 0.022 |
| H37Rv_KO_SugABC | 0.658 | 0.389 |
| H37Rv_KO_MbtN | 0.331 | 0.271 |
| Trans05 | 0.172 | 0.301 |
| macrophage_unactivated | -0.65 | -1.24 |
| IL1 | -0.78 | -1.531 |
| Rapamycin | -0.387 | -1.344 |
| Tcell | -0.671 | -1.329 |
| GMCSF | -0.129 | -1.65 |
| IFNab | -0.224 | -1.013 |
| IFNg | -0.551 | -1.358 |
| IFNg_GMCSF1 | 0.434 | -0.566 |
| Rv1432_day32 | 0.458 | 0.541 |
| Rv1565c_day32 | -0.13 | -1.061 |
| secA2_input | -0.545 | 0.512 |
| delta_Rv3594 | -0.135 | 0.061 |
| delta_Rv3717 | 0.122 | -0.146 |
| delta_Rv3811 | -0.086 | 0.03 |
| delta_Rv0954 | -0.322 | 0.193 |
| PonA1 | 0.032 | -0.314 |
| EccD1_KO | 1.046 | 0.434 |
| EspI_KO | 0.528 | 1.483 |
| PE35_KO | 0.169 | 0.298 |
| PPE68_KO | 0.246 | 0.035 |
| glycerol2 | 0.143 | 0.551 |
| lignocerate | 0.55 | 0.491 |
| oleate | 0.088 | 0.346 |
| phosphatidylcholine | 0.224 | 0.728 |
| acetate | 0.479 | -0.204 |
| glucAc | 0.385 | 0.637 |
| Rv0950ko | 0.41 | 0.47 |
| Rv1096ko | 0.464 | -0.106 |
| Rv3684ko | 0.445 | 0.029 |
| delta_otsA_trehalose | -0.953 | -0.588 |